AT4G37110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zinc-finger domain of monoamine-oxidase A repressor R1 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zinc-finger domain of monoamine-oxidase A repressor R1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT2G23530.1); Has 452 Blast hits to 447 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 54; Plants - 229; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17484343..17486197 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46932.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.20 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.90 | ||||||||||||||||||||||||||||
| Length | 417 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVVRTRAKC SIPVTNPNPT VGGGNSNVSI YEKCREDRIK ENLQRMKNLG IMDLSLKLKS EIRPAKRRYG NSNANPGRET SPIQLSVSSR RSSRLKQEPP 101: VSRRSSRLKN ATPVSYAEEP ELKKGKVSKE EIVLWVGEGV RPEIYTEEHE KLLGNTERTW ELFVDGCDKN GKRIYDPVRG KCCHQCRQKT LGYHTQCSQC 201: NHSVRGQFCG DCLYMRYGEH VLEALENPDW ICPVCRDICN CSFCRTKKGW LPTGAAYRKI HKLGYKSVAH YLIQTNQQSE TSEDDETDAP ADSQASEGDH 301: LLLITDGIQD NQIDENLDDD DGSNKNPDSA RKSLCFLSSG NNQTSVTDGD LKPLDVKEVD PATPVIIDLE AQCSETERMA NSANKENRET RSKRKMSAEP 401: NPNSIGGRLR QRRKIQA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)