AT4G37100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G23520.1); Has 644 Blast hits to 541 proteins in 145 species: Archae - 9; Bacteria - 25; Metazoa - 119; Fungi - 163; Plants - 272; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17479173..17481863 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 100772.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||
| Length | 896 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHFSLWKQIH HCASLILDKS KSSRRRRDGS DSSLNVKKKA ALIRKLYEDK LREALEEASE NGSLFKSQDI DQDNGDGSLG RSRSLARLHA QREFLRATAL 101: AAERIIESED SIPELREALT KFLSMYPKYQ ASEKIDQLRS DEYSHLSSSA SKVCLDYCGF GLFSYVQTLH YWDTCTFSLS EITANLSNHA LYGGAESGTV 201: EHDIKTRIMD YLNIPENEYG LVFTVSRGSA FRLLAESYPF QSNKRLLTMF DHESQSVNWM AQTAREKGAK AYNAWFKWPT LKLCSTDLKK RLSYKKRKKK 301: DSAVGLFVFP AQSRVTGTKY SYQWMALAQQ NHWHVLLDAG SLGPKDMDSL GLSLFRPEFI ITSFYRVFGH DPTGFGCLLI KKSVMGSLQS QSGKTGSGIV 401: KITPEYPLYL SDSVDGLDGL VGFEDHNDDK TKEAHRPGTQ MPAFSGAYTS AQVRDVFETE LLEDNISSDR DGTTSTTIFE ETESVSVGEL MKSPVFSEDE 501: SSDNSFWIDL GQSPLGSDQH NKIASPLPPI WLTNKRKQKQ RQSPKPIPKS YSSPLYDGND VLSFDAAVMS VTEHGTNSTP SRNRRSSSNH LHVQEIQEEN 601: CGHSFANGLK SSNISSEIKE SAIRRETEGE FRLLGGRDGG RSRLLGVEDE HPSKGRRVSF NMERVSHSIV EPGEASLASV YDEDYINTSD VENGDDEGAD 701: DEWDRRDTET EIVCRHIDHV NMLGLNKTTT RLRFLINWLV ISLLQLQVPE SGGRHMNLVQ IYGPKIKYER GAAVAFNVRD KSKGFVSPEI VQRLGDREGV 801: SLGIGILSHI RIVDEKPRNH RARTKEDSAL HLQNEAGKNG FIRFEVVTAS LSFLTNFEDV YKLWVFVAKF LNPGFSREGS LPTVEEEEEE AENSET |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)