AT4G25070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.612 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 14837 Blast hits to 10961 proteins in 1163 species: Archae - 189; Bacteria - 1924; Metazoa - 7665; Fungi - 1127; Plants - 653; Viruses - 80; Other Eukaryotes - 3199 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12872482..12876468 | ||||||||||||||||||||
| Molecular Weight (calculated) | 86622.30 Da | ||||||||||||||||||||
| IEP (calculated) | 5.05 | ||||||||||||||||||||
| GRAVY (calculated) | -0.85 | ||||||||||||||||||||
| Length | 765 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARRPGTSAS SSPTMSPSHR MSGGGGGISG KSTLRKQNAA ELLAKVMEKR EYDYDYDDED GGEDLYQVHL PPLTQSRRRD DKRIGKGSVN EKKAPAKKPI 101: ILPAPKFDDE SEDDETRANF RPNPVIIPKK NAREPRKAPA TKPVVLPPPK FSNVRRIPVE ISGRNARGSK EASTVKQVVS TPKFDDEYDS DEITEDVPRN 201: PVEIRGPVRG KVAPAVKPVV VLPTKFDDEY DSDEITEDVP RNPVEIRGTV RGKVAPAVKP VVVLPTKFDD EYDSDEITAD VSRNPVEVRD PVRGKLAPVV 301: KPVVLPTKFD DEYDSDEIAA DVSRKAVEIP QKNEKSTLRV RVPAYSRRNP LEEFEQNGED KQNVQCDVPA KQSEAQLKYK KRYHPANILA PNNSNQQEDD 401: REASALRDEL DMLQEENDNI MDKLQRAEER REAAEARAKE LEKQVASLGE GANFDVKLLK RKEAALRQRE AALRAAEQKR DGRNRETNAL SSEFQSLKDE 501: AEKSTEQLQE VEAEIKSLRT MIHRTILSQE EMEEVVLKRC WLARYWELAV QHGICEDIST SRYEHWSALA PLPSEVVLSA AQKSEDSWQT GGSDRTWSKV 601: ISNFSDLNGE GNIESMLAVE TGLREIASLK VEDAVMLALS RYRQTNVARQ AVTDPRVQGE PKFSETFELS HDEQQDILFK EAWLLYFWKR AKIHGVESDI 701: AEERLQFWIN RLGQHSSSHD AIDVERGMRE LRKLGIEQQL WETSRKELID SSFLPSYSVS DYNDE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)