AT3G51330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Eukaryotic aspartyl protease family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51350.1); Has 2269 Blast hits to 2259 proteins in 198 species: Archae - 0; Bacteria - 13; Metazoa - 189; Fungi - 203; Plants - 1703; Viruses - 2; Other Eukaryotes - 159 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19053480..19056152 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57867.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 529 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVARQVFVL LSLLVVCWGL ERCEASGKFS FEVHHMFSDR VKQSLGLDDL VPEKGSLEYF KVLAQRDRLI RGRGLASNNE ETPITFMRGN RTISIDLLGF 101: LHYANVSVGT PATWFLVALD TGSDLFWLPC NCGSTCIRDL KEVGLSQSRP LNLYSPNTSS TSSSIRCSDD RCFGSSRCSS PASSCPYQIQ YLSKDTFTTG 201: TLFEDVLHLV TEDEGLEPVK ANITLGCGKN QTGFLQSSAA VNGLLGLGLK DYSVPSILAK AKITANSFSM CFGNIIDVVG RISFGDKGYT DQMETPLLPT 301: EPSPTYAVSV TEVSVGGDAV GVQLLALFDT GTSFTHLLEP EYGLITKAFD DHVTDKRRPI DPELPFEFCY DLSPNKTTIL FPRVAMTFEG GSQMFLRNPL 401: FIVWNEDNSA MYCLGILKSV DFKINIIGQN FMSGYRIVFD RERMILGWKR SDCFEDESLE STTPPPPETE APSPSASTPL PSLLPPPAAA TPPQIDPRNS 501: TRNSGTGTAA NLVPLASQLL LLLPLLAFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)