AT4G09520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cofactor-independent phosphoglycerate mutase | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cofactor-independent phosphoglycerate mutase; FUNCTIONS IN: phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cofactor-independent phosphoglycerate mutase, archaeal (InterPro:IPR004456), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (InterPro:IPR019304); BEST Arabidopsis thaliana protein match is: Cofactor-independent phosphoglycerate mutase (TAIR:AT3G30841.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:6024970..6026751 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53127.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.26 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||
| Length | 492 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEVQKRVAF ILIDGLGDVS IPRLGYKTPL QAAEIPNLDA IASAGINGLM DPVEVGLGCG SDTAHLSLMG YDPRVYYRGR GAFESMGAGL AMSPGDIAFK 101: SNFATLDEDS GVVVSRRADR HFEEEGPILC AALDGMKLPS FPEYEVRVRY ATEHRCGVVV KGPKLSGNIS GTDPLKDNRL LLEAKPLDES EEANHTAKVV 201: NELSREISRI LVSHPVNVKR AAQGKNIANL VLLRGCGIRI EVPPFHEKHG LWPCMVAPTK IIAGLGMSLG IDILEALGAT GDYRTLLTSK AIAIANALSA 301: PLNPCPNVFE PAEDGHKPGR SDGYDFGFLH IKAIDDAGHD KATLFKVRGL EAVDKAIRQL AKLLWQAESS SNYQYFLCVT GDHSTPVEYG DHSFEPVPFT 401: MCRLKDFVRA VGGESALLET SLDPFPLPTD IASSENVIGK EEEDCGRREA SLAISGDSVS ELNEIAAARR CLGRFHGGEM MGVITKFLKL DV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)