AT4G08480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : mitogen-activated protein kinase kinase kinase 9 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
mitogen-activated protein kinase kinase kinase 9 (MAPKKK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 1 (TAIR:AT4G08500.1); Has 126354 Blast hits to 124684 proteins in 3992 species: Archae - 124; Bacteria - 13458; Metazoa - 47584; Fungi - 12553; Plants - 31595; Viruses - 535; Other Eukaryotes - 20505 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:5388253..5391507 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84978.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 773 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKSSDKSPV RQHDTATQIN SDAVSSSTSF TDSDSTCSFL TPSMEFPDRI SFRRIDFSEA APTGVVLPST SSELTRSNSS ENKIPNEDIS VSTSSRYLVF 101: DKILALMKKS PGRRGDKTSP ARRLDRSDAV RRNIDYDAGE DSSSLLITRS LDFPNRTSFR VDGVDDGEID RIYQYIGVSG PEDFAISSDA WKARMEHERS 201: SSDVVNKLKS LDLDSREAGP SGGVVASSSM NHKFQGHDLS EAGSIGVVVA SNFTLSESNK IENLNSLRDK EIVDGDMVEN RCGIERKPTI LVKSRGYLVH 301: NDDVGVGGGI KGVRPPVLNV PRADKEVVDG GTVESKSGIE WKPTILVKSK GYLVSNDGGI KGVTSPVLNL RPTDKEVVDS GTVENRRGIK GVRPSVLKPP 401: PVMKLPPVDL PGSSWDILTH FAPDSEIVRR PSSSSSSENG CDEEEAEDDK VEKEETGDMF IQLEDTTDEA CSFTTNEGDS SSTVSNTSPI CVSGGSINTS 501: WQKGQLLRQG SFGSVYEAIS EDGDFFAVKE VSLLDQGSQA QECIQQLEGE IALLSQLEHQ NILRYRGTDK DGSNLYIFLE LVTQGSLLEL YRRYQIRDSL 601: ISLYTKQILD GLKYLHHKGF IHRDIKCATI LVDANGTVKL ADFGLAKVSK LNDIKSRKET LFWMAPEVIN RKDNDGYRSP ADIWSLGCTV LEMCTGQIPY 701: SDLEPVEALF RIRRGTLPEV PDTLSLDARH FILKCLKLNP EERPTATELL NHPFVRRPLP SSGSGSTSPL IRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)