AT3G66658.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : aldehyde dehydrogenase 22A1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 55879 Blast hits to 55806 proteins in 2928 species: Archae - 471; Bacteria - 33034; Metazoa - 2477; Fungi - 2111; Plants - 1208; Viruses - 0; Other Eukaryotes - 16578 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2095471..2099013 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61022.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.67 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.05 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 554 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPFWWPLIVL AFAYAICKFL LMLIPPNVPS IDVDASDVLA HGKDTEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSPTEVEE RVTLSRKAQK 101: TWAQSSFKLR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPES RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY 201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG 301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIG QVTKIVKSVS AGPPLTGRYD MGAICLQEHS EHLQSLVNDA LDKGAEIAVR 401: GSFGHLGEDA VDQYFPPTVL INVNHNMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSK HRAKQIASQI QCGVAAINDF ASNYMCQSLP 501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQAISGS RKRI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)