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AT3G57062.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AK228360EMBL:CP002686EnsemblPlants:AT3G57062EnsemblPlants:AT3G57062.1
EnsemblPlants:AT3G57062.2entrez:6240237GeneID:6240237Gramene:AT3G57062.1
Gramene:AT3G57062.2HOGENOM:HOG000120696KEGG:ath:AT3G57062PhylomeDB:Q0WRF0
Proteomes:UP000006548RefSeq:NP_001118850.1RefSeq:NP_001190115.1TAIR:AT3G57062
TMHMM:TMhelixUniGene:At.68617UniProt:Q0WRF0
Coordinates (TAIR10) chr3:+:21121443..21121589
Molecular Weight (calculated) 5251.62 Da
IEP (calculated) 5.52
GRAVY (calculated) 0.81
Length 48 amino acids
Sequence (TAIR10)
(BLAST)
1: MAMPLGMAMY LMRMVWFSLS GWVFTCVAIA DEIAGSLRNG DIGPFHVG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)