AT3G44970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.978 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cytochrome P450 superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 2 (TAIR:AT5G48000.5); Has 31585 Blast hits to 31508 proteins in 1695 species: Archae - 52; Bacteria - 6275; Metazoa - 10768; Fungi - 5445; Plants - 7650; Viruses - 6; Other Eukaryotes - 1389 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:16432443..16434848 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54949.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.71 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 479 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLFWNTGFC VIVLVVARVG HWWYQWSNPK SNGKLPPGSM GFPIIGETLD FFKPYGFYEI SPYLKKKMLR YGPLFRTNIL GVKTVVSTDK DVNMEILRQE 101: NKSFILSYPD GLMKPLGKDS LFLKIGNIHK HIKQITLHLL SSEGLKRKIL KDMDRVTREH LSSKAKTGRL DVKDAVSKLI IAHLTPKMMS NLKPQTQAKL 201: MGIFKAFTFD WFRTSYLISA GKGLYNTLWA CREGMREIKD IYTMRKTSEE KYDDFLNTAI EESEKAGELL NENAIITLIF TLSCVTQDTT SKAICLAVKF 301: LLENPKVLAE LKKEHEVILE SREDKEGGVT WEEYRHKMTF TNMVINESLR ITNLAPMLFR KAVKDVEIKG YTIPAGWIVM IIPSVVHFDP EIYENPFEFN 401: PWRWEGKELR AGSKTFMVFG TGLRQCAGAE FARLQISVFL HHLVTTYNFS LHQDCEVLRV PAAHLPNGIS INISKCPKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)