AT3G05170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.943 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1466738..1468219 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36882.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.12 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||||||||||||||
| Length | 316 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPDNKLLPK RIILVRHGES EGNLDTAAYT TTPDHKIQLT DSGLLQAQEA GARLHALISS NPSSPEWRVY FYVSPYDRTR STLREIGRSF SRRRVIGVRE 101: ECRIREQDFG NFQVKERMRA TKKVRERFGR FFYRFPEGES AADVFDRVSS FLESLWRDID MNRLHINPSH ELNFVIVSHG LTSRVFLMKW FKWSVEQFEG 201: LNNPGNSEIR VMELGQGGDY SLAIHHTEEE LATWGLSPEM IADQKWRANA HKGEWKEDCK WYFGDFFDHM ADSDKECETE ATEDREEEEE EEGKRVNLLT 301: SSEYSNEPEL YNGQCC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)