AT2G44970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.818 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 180 Blast hits to 180 proteins in 62 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18548999..18552019 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54728.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.25 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||
| Length | 503 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFRFDPTFLK LQKLIKMGEA GQSRDGESVT PLVGGGNGDN AVAPQVFNSL PALNEAASYI TQATSYLGSC FSDYSVEYGG KDTISHPHEL LRSTSGVDGN 101: SPVSVCISPG ERFSTSSEAS TSDANSPSRE STEILPQATN AIVTSNRLNL NGISMFQGLI ERARRTVRGS ADDIGWLQRA PEMPPVEDGT DRFNKILEDI 201: GHGVHRLPNT VVYLLVPGLF SNHGPLYFVD TKTKFSKMGL ACHIAKIHSE SSVEKNAREI KEYIEELCWG SNKRVLLLGH SKGGIDAAAA LSLYWPELKD 301: KVAGLVLAQS PYGGSPIATD ILREGQLGDY VNLRKMMEIL ISKVIKGDIQ ALEDLTYERR KEFLKNHPLP RELPTVSFRT EASISPAVLS TLSHVAHAEL 401: PLTNQAAKLP VVMPLGAAMA ACAQLLQVRY GEKSDGLVTC CDAEVPGSVV VRPKRKLDHA WMVYSSLNEV PLEADAAQVC EALLTLLVQV EQERQQKLAT 501: KID |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)