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AT2G42900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant basic secretory protein (BSP) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant basic secretory protein (BSP) family protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); Has 52 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZTXeggNOG:ENOG4111BHWEMBL:AC006580EMBL:AC006931
EMBL:BT012596EMBL:BT014836EMBL:CP002685EnsemblPlants:AT2G42900
EnsemblPlants:AT2G42900.1entrez:818891GeneID:818891Gramene:AT2G42900.1
hmmpanther:PTHR33321hmmpanther:PTHR33321:SF3HOGENOM:HOG000153489InterPro:IPR007541
KEGG:ath:AT2G42900OMA:YCERRSEPfam:PF04450PhylomeDB:Q9SJG7
PIR:F84859Proteomes:UP000006548RefSeq:NP_181818.1TAIR:AT2G42900
UniGene:At.45677UniProt:Q9SJG7
Coordinates (TAIR10) chr2:+:17854599..17855429
Molecular Weight (calculated) 31204.30 Da
IEP (calculated) 9.64
GRAVY (calculated) -0.29
Length 276 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSMTDQTLL QPFLAKPTTK GLATESDSGI ILRLFSILLV GAISLWANHE ASKGFSISII NDAKDSPSGK RFALFFESDD TAVRILLDAS FFVERFLYEG
101: VPHRLRKPVN HVTVQFCGNS SDRVDRFSVT SGASHGEYVI RLSPSLTERK KFSNAVESAL RRSMVRIWLW GDESGASPEL VAGMVEYLAV ESRKRRHFEK
201: FGGNWKDKEK SVYVVSLLDY CERRSEGFIR RLNHGMRLRW DDRTVDLASS GACGSRKDVL RELKMDDSGL IIERRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)