AT2G38995.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-acyltransferase (WSD1-like) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G37300.1); Has 952 Blast hits to 940 proteins in 139 species: Archae - 2; Bacteria - 706; Metazoa - 10; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16282139..16284700 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55327.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.52 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||
| Length | 488 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYTMKKGKDM AKEEQETAAI EPLSPVSQLF VSPSLYCFII FTLGFQTRCN PSTIVEGVKN TWIKLPRFSS KVEIKKNGKA SWVPVSVRVE DHVVVPDLDY 101: SNIENPDQFI EDYTSKLANT PMDMSRPLWE LHLLNIKTSN AESLAIGKFH HSLGDGMSLI SLLLASSRKT SDPDALPTTA ATRKHASSNK KSWWLVGRFW 201: FMIRIIFTTV VELFKYLLTL CFMRDTKTPL MGKTGDAIRS RKVIHRIVSF DDVKLVKNNM DMKVNDVLLG MTQAGLSRYL SRKYVDEDMV VEKKKNLEKI 301: RLRGTVFVNL RADTKLEDLA NMMAKGSKCR WGNFVGVIIF PLWVRSEDDP LEYVRRAKST MDIKKLSIES LICYGLIKLT RKILGGKVVE TLVRRLFDHT 401: TLTFSNVMGP DEDISFFDHP MSYVAASALG GPQALIIHYV TYVNKIVINL AVDTSVIRDP HLLCDDLVES LDIIKLAAME KGVHKMEV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)