AT2G34780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : maternal effect embryo arrest 22 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); Has 114610 Blast hits to 64620 proteins in 2807 species: Archae - 1395; Bacteria - 19220; Metazoa - 50238; Fungi - 9135; Plants - 5590; Viruses - 506; Other Eukaryotes - 28526 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14668653..14673607 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 144354.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.16 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||
| Length | 1297 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MATTNAPPEL ASGNPCCLAW QGKYIGMKKR RDAFKEGVTL LQKAIENVNA EKSNLERKFG EMATDGDTKE NGSTVKASLE KEISRLKFEI VSLQQKLERN 0101: LKEKSEETKL LQDQASGREK EINELRDLLK KETLRADSSE EEREHAFKEL NKAKALIVKD EEIEQDIPEV KREISLVKNL LASERQKTES ERKKAESEKK 0201: KADKYLSELE VLRNSAHKTS SDLLTLTSNL ETVKKQLELE KQKTLKEKKR ADMESAKARD QMKLAEDVSK KFEIVRARNE ELKKEMESQT ASSQVKFAEN 0301: SEKLEEKIRL LEMNKKTAMD WKSRTDDLTQ QLQEAQLVAE GLKKQVHELS LSQKSIKTHS ISPQKVRDLE KAEMRLLKKK MKFERNCAKH SQTVAKFEKF 0401: RREFQCEELG RLKLEFGSLT NRMNLLDEYF STDVEGTAGL GKATGCRKLL TLNSQKNRNG EKHSDARCKL VASSGYQEQA CKLSAHLISK SGRGVSESVS 0501: GTISQLESPT GGSRKLPSSG VISSATSFSD GQLLASQGRE QFSVTTSAEI AKDKPNIQPT KSSMLQKISD TSKNGNLCLV AENYLQRCQR DIHENSRKRK 0601: RMLEAVVSHK HLASGDKKKN LPIGEKMGTL QSMIVGTGSR PSEKEETLVP PDRQGGSSAI DITVSKKRRV SCKKKIIVQN SLEFNQSGKT PGNIAGKTTC 0701: LSTATGHDVK TLFSEDFAAT DYMKLLELDN LEEENYYQMA RESLLSPDLP QVDFLGCEIM NEDKNPARAI DLAASNSMYL RETILSSESP SLNTQNISVT 0801: VEMPPMLKPL HGHLLKHFIV FSNIEDQNSI IIIIHATNNC LQRCPSVTKE QWAVPAILSS LKMEENLLAQ ERACVFLSLL LHNFSMVHTT KTGNTLNVDS 0901: FSCLDSFSKH IRGVMADTEA GVMLSGFSEE LLCLLQDLLS GQRVLFSVKS SETCESDLSI PVTLNGENVA LVNKIALTDQ LVAGSAILAA ICTALDRIGY 1001: ICEASFEILH KYSHEKTSVL LTILHVFAYI AGEKMVLSSE HGISIAVLKY IVMFLENKHF GTVEGSSRLH PGKNKCPFSD RSSSLEAMAS KLMEILQEFT 1101: ESNTLHKSLT GSLGSSHLEK TEFRPAHKDF QCVLTRDQSI NLCDILSLVE LIACYTAWDW TSANIVAPLL KMLGMPLPMN LSVAIVSLLG QLSSIGVDAG 1201: GYENEGISNL RVKLSAFLQC ETTLKAGFAV QIATVSSLLK TLQLKFPIDF QDKTTMIPGS GDQSLSGSVN VVTKWLSLLS KEQRVFAFEF LQTNVVR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)