AT2G32660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.843 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 22 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 22 (RLP22); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 72946 Blast hits to 23279 proteins in 925 species: Archae - 37; Bacteria - 3607; Metazoa - 12485; Fungi - 751; Plants - 51027; Viruses - 14; Other Eukaryotes - 5025 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13853897..13855666 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65683.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.74 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPFLSYLDLS ENHLTGSFEI SNSSSKLENL NLGNNHFETE IIDPVLRLVN LRYLSLSFLN TSHPIDLSIF SPLQSLTHLD LHGNSLTLTS VYSDIDFPKN 101: MEILLLSGCN ISEFPRFLKS LKKLWYLDLS SNRIKGNVPD WIWSLPLLVS LDLSNNSFTG FNGSLDHVLA NSSVQVLDIA LNSFKGSFPN PPVSIINLSA 201: WNNSFTGDIP LSVCNRTSLD VLDLSYNNFT GSIPPCMGNF TIVNLRKNKL EGNIPDEFYS GALTQTLDVG YNQLTGELPR SLLNCSFIRF LSVDHNRIND 301: SFPLWLKALP NLKVLTLRSN SFHGPMSPPD DQSSLAFPKL QILEISHNRF TGSLPTNYFA NWSVKSLKMY DEERLYMGDY SSDRFVYEDT LDLQYKGLYM 401: EQGKVLTFYS AIDFSGNKLE GEIPESIGLL KTLIALNLSN NSFTGHIPMS FANVTELESL DLSGNKLSGE IPQELGRLSY LAYIDVSDNQ LTGKIPQGTQ 501: IIGQPKSSFE GNSGLCGLPL EESCLREDAP STQEPEEEEE EILEWRAAAI GYGPGVLFGL AIGHVVALYK PGWFIKNNGQ NRLRGIRHP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)