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AT2G28970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28990.1); Has 169810 Blast hits to 124514 proteins in 4517 species: Archae - 105; Bacteria - 13883; Metazoa - 45515; Fungi - 10149; Plants - 80466; Viruses - 403; Other Eukaryotes - 19289 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G28970-MONOMEReggNOG:COG0515eggNOG:ENOG410J9ZBEMBL:AC005315
EMBL:CP002685EnsemblPlants:AT2G28970EnsemblPlants:AT2G28970.1entrez:817446
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:817446GO:GO:0004674
GO:GO:0005524GO:GO:0016021Gramene:AT2G28970.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT2G28970OMA:TENETHV
Pfam:PF00069Pfam:PF12819Pfam:PF13855Pfscan:PS50011
PhylomeDB:O81067PIR:T02729PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_180463.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:O81067STRING:3702.AT2G28970.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G28970TMHMM:TMhelix
UniGene:At.52959UniProt:O81067
Coordinates (TAIR10) chr2:+:12443919..12448163
Molecular Weight (calculated) 87293.10 Da
IEP (calculated) 6.46
GRAVY (calculated) -0.15
Length 786 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSHLLLAII GTFAVIVGAQ KQEGFISLDC GFPIEESPYS DPSTGLTFTS DSTFIQTGES GRVDKELNKI FRKPYLTLRY FPEGKRNCSL RNSFRVHCST
101: SDSEIRYDDD SYDRVWYPFF SSSFSYITTS LNINNSDTFE IPKAALKSAA TPKNASAPLI ITWKPRPSNA EVYFYLHFAE IQTLAANETR EFDIVFKGNF
201: NYSAFSPTKL ELLTFFTSGP VQCDSDGCNL QLVRTPNSTL PPLINALEAY TIIEFPQLET SLSDVNAIKN IKATYRLSKT SWQGDPCLPQ ELSWENLRCS
301: YTNSSTPPKI ISLNLSASGL TGSLPSVFQN LTQIQELDLS NNSLTGLVPS FLANIKSLSL LDLSGNNFTG SVPQTLLDRE KEGLVLKLEG NPELCKFSSC
401: NPKKKKGLLV PVIASISSVL IVIVVVALFF VLRKKKMPSD AQAPPSLPVE DVGQAKHSES SFVSKKIRFA YFEVQEMTNN FQRVLGEGGF GVVYHGCVNG
501: TQQVAVKLLS QSSSQGYKHF KAEVELLMRV HHKNLVSLVG YCDEGDHLAL IYEYMPNGDL KQHLSGKRGG FVLSWESRLR VAVDAALGLE YLHTGCKPPM
601: VHRDIKSTNI LLDERFQAKL ADFGLSRSFP TENETHVSTV VAGTPGYLDP EYYQTNWLTE KSDVYSFGIV LLEIITNRPI IQQSREKPHL VEWVGFIVRT
701: GDIGNIVDPN LHGAYDVGSV WKAIELAMSC VNISSARRPS MSQVVSDLKE CVISENSRTG ESREMNSMSS IEFSMGIDTE VIPKAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)