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AT1G58225.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK119105EMBL:BT009673EMBL:CP002684EnsemblPlants:AT1G58225
EnsemblPlants:AT1G58225.1entrez:842190ExpressionAtlas:Q8GW35GeneID:842190
Gramene:AT1G58225.1HOGENOM:HOG000148307OMA:TSRIIFWProteomes:UP000006548
RefSeq:NP_849824.1TAIR:AT1G58225UniGene:At.47275UniProt:Q8GW35
Coordinates (TAIR10) chr1:+:21564205..21564995
Molecular Weight (calculated) 16293.60 Da
IEP (calculated) 10.18
GRAVY (calculated) -0.02
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MKARSSKGGL VAILALVVYC FFENMDGNSI DVPSYEPVGS YSTGGFFAVE NKDKMLKSFP SYNEYLKRFN LASVEIWQTV RRKCRDSFIS LSIKSLHFFV
101: SKFTQFRYSI STVAPTSRSW TSRIIFWVTL TRSVSSMAND TTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)