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AT1G50290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.491
golgi 0.272
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AF424589EMBL:AY124827EMBL:CP002684EnsemblPlants:AT1G50290
EnsemblPlants:AT1G50290.1entrez:841451GeneID:841451GO:GO:0005829
GO:GO:0006979Gramene:AT1G50290.1KEGG:ath:AT1G50290Proteomes:UP000006548
RefSeq:NP_564564.1STRING:3702.AT1G50290.1TAIR:AT1G50290UniGene:At.27053
UniProt:Q944R3
Coordinates (TAIR10) chr1:-:18627858..18628262
Molecular Weight (calculated) 16033.70 Da
IEP (calculated) 9.95
GRAVY (calculated) 0.18
Length 134 amino acids
Sequence (TAIR10)
(BLAST)
001: MKEINFGFVS KDGRSSSGKS GFYKRFWPAF ILPPPFDRLF LPIALVSFSV FLSIISKDFN WRLILGHNSL RLSFRICIFR KFDLQNYLKY ERKFCFQHIG
101: IACSRFYMFM ELRSIKFEEY SDFSFLITCF CQIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)