AT1G35510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.834 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G01480.1); Has 838 Blast hits to 827 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:13071486..13074675 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63769.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.15 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||
| Length | 568 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHGLSRLGNG SSNGRINIPS PSPPSSPRIR HTRGKSLAGG VYKQGLGERL VFLLFSIVFR RKGVLLLAPL LYIAGMLLFM GSFGFTVLDL GHGVEIVYRR 101: GSPGSVYRSP KVFKRLWPVM EADVNGSSHN VLMEAWKPRV KSVWKPCIST NVSAAGSNSN GYFIIEANGG LNQQRLSICD AVAVAGLLNA TLVIPIFHLN 201: SVWRDSSKFG DIFDEDFFIY ALSKNVNVVK ELPKDVLERY NYNISSIVNL RLKAWSSPAY YLQKVLPQLL RLGAVRVAPF SNRLAHAVPA HIQGLRCLAN 301: FEALRFAEPI RLLAEKMVDR MVTKSVESGG KYVSVHLRFE MDMVAFSCCE YDFGQAEKLE MDMARERGWK GKFRRRGRVI RPGANRIDGK CPLTPLEVGM 401: MLRGMGFNNS TLVYVAAGNI YKADKYMAPL RQMFPLLQTK DTLATPEELA PFKGHSSRLA ALDYTVCLHS EVFVSTQGGN FPHFLIGHRR YLYKGHAETI 501: KPDKRKLVQL LDKPSIRWDY FKKQMQDMLR HNDAKGVELR KPAASLYTFP MPDCMCKEPD PEPETDPA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)