AT1G28430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.976 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 24 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 24 (CYP705A24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 1 (TAIR:AT4G15330.1); Has 32235 Blast hits to 32061 proteins in 1649 species: Archae - 48; Bacteria - 2998; Metazoa - 11594; Fungi - 7262; Plants - 9240; Viruses - 6; Other Eukaryotes - 1087 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:9992986..9994642 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59271.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.88 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 521 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTVMVSFDLL NCFIFTLIFL ISTLFLFVLF YKKPNDGFDV PPSPPSLPII GHLHLLLFAS IHKCFQKISS KYGPFLHLRI FHVPIVLVSS ASTAYDIFKT 101: NDINVSYRGD VAIDECIVFG SFGYFRAPCE DYWKFMRKLI MARALGPQAL ERTRGVRAAE LERFHRKLLD KAMKKQSLKI GEEARILVNN TLGKMSLGSS 201: FSIENNDGTK VSEYSIKLAD LSQMFCVAQI FHKPLEKLGI SLLKKQIMDV SHKFEELLEN IVVKYEEKMD NHQSTEFMDA LLAAYQDENA EYKITRNHIK 301: ALLAELFFGA GESSSSTTRW AMGEIFNNPR IFEKLRTEID SVVGTTRLIQ ESDLPKLPYL QAVVKESLRL HPVGAVLPRE FTQDCNIGGF YIHEGTSLVV 401: NAYAVMRDPD IWEDPNEFKP ERFLDASRLG QEEEKKEKTL KFLPFGAGRR GCPGLYLGYT LVETTIGVMV QCFDWEIEGD KVNMQEGSGL RFFLDLAHPL 501: KCTPIPRIIN HEPSNTQIPN S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)