AT1G07550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G14510.1); Has 160053 Blast hits to 116886 proteins in 4275 species: Archae - 103; Bacteria - 12717; Metazoa - 42496; Fungi - 9017; Plants - 77350; Viruses - 370; Other Eukaryotes - 18000 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2322709..2326512 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96790.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 864 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTCTRLLFA ACATLSILHL VQSQNQQGFI SLDCGLASNE SPYNEANSNL TYISDADFIQ GGKTGNVQKD LLMKLRKPYT VLRYFPDGIR NCYSLNVKQD 101: TNYLIRVMFR YGNYDGLNNS PRFDLYLGPN IWTTIDMGKS GDGVLEEIIH ITRSNILDIC LVKTGTSTPM ISSIELRPLL YDTYIAQTGS LRNYNRFYFT 201: DSNNYIRYPQ DVHDRIWVPL ILPEWTHINT SHHVIDSIDG YDPPQDVLRT GAMPANASDP MTITWNLKTA TDQVYGYIYI AEIMEVQANE TREFEVVVNN 301: KVHFDPFRPT RFEAQVMFNN VPLTCEGGFC RLQLIKTPKS TLPPLMNAFE IFTGIEFPQS ETNQNDVIAV KNIQASYGLN RISWQGDPCV PKQFLWTGLS 401: CNVIDVSTPP RIVKLDLSSS GLNGVIPPSI QNLTQLQELD LSQNNLTGKV PEFLAKMKYL LVINLSGNKL SGLVPQALLD RKKEGLKLLV DENMICVSCG 501: TRFPTAAVAA SVSAVAIIIL VLVLIFVLRR RKPSAGKVTR SSFKSENRRF TYSDVNKMTN NFQVVIGKGG FGVVYQGCLN NEQAAIKVLS HSSAQGYKEF 601: KTEVELLLRV HHEKLVSLIG YCDDDNGLAL IYELMGKGNL KEHLSGKPGC SVLSWPIRLK IALESAIGIE YLHTGCKPKI VHRDVKSTNI LLSEEFEAKI 701: ADFGLSRSFL IGNEAQPTVV AGTFGYLDPE YHKTSLLSMK SDVYSFGVVL LEIISGQDVI DLSRENCNIV EWTSFILENG DIESIVDPNL HQDYDTSSAW 801: KVVELAMSCV NRTSKERPNM SQVVHVLNEC LETCEKWRKS QEVDLSSPLE LSIVVDTEIN PKAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)