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AT4G26530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:20061580 (2010): plastid
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Aldolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26530-MONOMERBioCyc:ARA:GQT-1888-MONOMEREC:4.1.2.13eggNOG:COG3588eggNOG:KOG1557EMBL:AL022223EMBL:AL161565
EMBL:AY087376EMBL:BT002006EMBL:BT008844EMBL:CP002687EnsemblPlants:AT4G26530EnsemblPlants:AT4G26530.1EnsemblPlants:AT4G26530.2
entrez:828759Gene3D:3.20.20.70GeneID:828759GO:GO:0004332GO:GO:0006096GO:GO:0009507Gramene:AT4G26530.1
Gramene:AT4G26530.2gramene_pathway:4.1.2.13gramene_pathway:CALVIN-PWYgramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042gramene_pathway:PWYQT-4428hmmpanther:PTHR11627
hmmpanther:PTHR11627:SF19HOGENOM:HOG000220876IntAct:O65581InterPro:IPR000741InterPro:IPR013785InterPro:IPR029768KEGG:00010+4.1.2.13
KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13KEGG:00710+4.1.2.13KEGG:ath:AT4G26530KO:K01623OMA:PNMVIDG
Pfam:PF00274PhylomeDB:O65581PIR:T05051ProMEX:O65581PROSITE:PS00158Proteomes:UP000006548Reactome:R-ATH-114608
Reactome:R-ATH-70171Reactome:R-ATH-70263Reactome:R-ATH-70350RefSeq:NP_001031721.1RefSeq:NP_194383.1scanprosite:PS00158SMR:O65581
STRING:3702.AT4G26530.1SUPFAM:SSF51569TAIR:AT4G26530UniGene:At.57980UniPathway:UPA00109UniProt:O65581
Coordinates (TAIR10) chr4:+:13391566..13392937
Molecular Weight (calculated) 38295.70 Da
IEP (calculated) 5.53
GRAVY (calculated) -0.12
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAFVGKYAD ELIKTAKYIA TPGKGILAAD ESTGTIGKRF ASINVENIES NRQALRELLF TSPGTFPCLS GVILFEETLY QKTTDGKPFV ELLMENGVIP
101: GIKVDKGVVD LAGTNGETTT QGLDSLGARC QEYYKAGARF AKWRAVLKIG ATEPSELSIQ ENAKGLARYA IICQENGLVP IVEPEVLTDG SHDIKKCAAV
201: TETVLAAVYK ALNDHHVLLE GTLLKPNMVT PGSDSPKVAP EVIAEYTVTA LRRTVPPAVP GIVFLSGGQS EEEATLNLNA MNKLDVLKPW TLTFSFGRAL
301: QQSTLKAWAG KTENVAKAQA TFLTRCKGNS DATLGKYTGG ASGDSAASES LYEEGYKY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)