AT4G24100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.535 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G10730.1); Has 125358 Blast hits to 123605 proteins in 4454 species: Archae - 114; Bacteria - 14309; Metazoa - 46798; Fungi - 12057; Plants - 31507; Viruses - 632; Other Eukaryotes - 19941 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12515223..12519336 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78751.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.00 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.57 | ||||||||||||||||||||||||||||||||||||||||
| Length | 709 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVGGGGGSSG RGGGSGSGSS KQQRGFSMNP KDYKLMEEIG HGASAVVYRA IYLPTNEVVA IKCLDLDRCN SNLDDIRRES QTMSLIDHPN VIKSFCSFSV 101: DHSLWVVMPF MAQGSCLHLM KTAYSDGFEE SAICCVLKET LKALDYLHRQ GHIHRDVKAG NILLDDNGEI KLGDFGVSAC LFDNGDRQRA RNTFVGTPCW 201: MAPEVLQPGN GYNSKADIWS FGITALELAH GHAPFSKYPP MKVLLMTIQN APPGLDYDRD KKFSKSFKEM VAMCLVKDQT KRPTAEKLLK HSCFKHTKPP 301: EQTVKILFSD LPPLWTRVKS LQDKDAQQLA LKRMATADEE AISQSEYQRG VSAWNFDVRD LKTQASLLID DDDLEESKED EEILCAQFNK VNDREQVFDS 401: LQLYENMNGK EKVSNTEVEE PTCKEKFTFV TTTSSLERMS PNSEHDIPEA KVKPLRRQSQ SGPLTSRTVL SHSASEKSHI FERSESEPQT APTVRRAPSF 501: SGPLNLSTRA SSNSLSAPIK YSGGFRDSLD DKSKANLVQK GRFSVTSGNV DLAKDVPLSI VPRRSPQATP LRKSASVGNW ILEPKMPTAQ PQTIKEHSSH 601: PTSSSPIMPQ LQHLFQQNSI QQDLIMNLLN SLQPVEATEG SQSGKLPPLP RSDSNGNVEP VASERERLLL SSISDLRARL DDLTEELDIE KSKYSQLQQK 701: LKAFTGREH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)