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AT3G18070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28003327 (2017): extracellular region apoplast
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 43
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 43 (BGLU43); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: B-S glucosidase 44 (TAIR:AT3G18080.1); Has 11267 Blast hits to 10950 proteins in 1466 species: Archae - 142; Bacteria - 7742; Metazoa - 714; Fungi - 202; Plants - 1468; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G18070-MONOMERBioCyc:ARA:GQT-414-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723eggNOG:KOG0626EMBL:AB020749
EMBL:CP002686EMBL:DQ446670EnsemblPlants:AT3G18070EnsemblPlants:AT3G18070.1entrez:821332Gene3D:3.20.20.80GeneID:821332
Genevisible:Q9LV34GO:GO:0005975GO:GO:0008422gramene_plant_reactome:1119284gramene_plant_reactome:6876880hmmpanther:PTHR10353hmmpanther:PTHR10353:SF28
HOGENOM:HOG000088630InParanoid:Q9LV34InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853KEGG:ath:AT3G18070OMA:DHIAACH
PANTHER:PTHR10353PaxDb:Q9LV34Pfam:PF00232Pfam:Q9LV34PhylomeDB:Q9LV34PRIDE:Q9LV34PRINTS:PR00131
PRO:PR:Q9LV34ProteinModelPortal:Q9LV34Proteomes:UP000006548RefSeq:NP_001078176.1RefSeq:NP_188435.2SMR:Q9LV34STRING:3702.AT3G18070.1
SUPFAM:SSF51445TAIR:AT3G18070tair10-symbols:BGLU43UniGene:At.53364UniProt:Q9LV34
Coordinates (TAIR10) chr3:+:6187294..6189947
Molecular Weight (calculated) 57246.80 Da
IEP (calculated) 7.29
GRAVY (calculated) -0.42
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MFLFLLLLSA SRSGEESPSG DAVPLATGGL NRKSFPEGFL FGTATSAYQV EGETHQDGRG PSIWDAFVKI PGKIANNATA EITVDQYHRY KEDVDLMQNL
101: NIDAYRFSIS WSRIFPEGSG KINSNGVAYY NRLIDYLIEK GITPYANLYH YDLPLALEQK YQGLLSKQGR FCGLRRVLFQ TFGDRVKNWM TFNEPRVVAA
201: LGYDNGIFAP GRCSEAFGNC TDGNSATEPY IVAHHLILAH AAAVQRYRQN YQEKQKGRVG ILLDFVWFEP LTSSQADNDA AQRARDFHVG WFIHPIVYGE
301: YPNTLQNIVK ERLPKFTEEE VKMVKGSIDF VGINQYTTYF MSDPKISTTP KDLGYQQDWN VTFNFAKNGT PIGPRAHSEW LYNVPWGMYK ALMYIEERYG
401: NPTMILSENG MDDPGNITLT QGLNDTTRVK YYRDYLVQLK KAVDDGANLT GYFAWSLLDN FEWLSGYTSR FGIVYVDYKD LKRYPKMSAL WFKQLLKRDQ
501: K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)