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AT2G36250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Tubulin/FtsZ family protein
Curator
Summary (TAIR10)
Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.
Computational
Description (TAIR10)
FTSZ2-1; FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 10598 Blast hits to 10598 proteins in 3190 species: Archae - 463; Bacteria - 6301; Metazoa - 8; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 3672 (source: NCBI BLink).
Protein Annotations
BioGrid:3541eggNOG:COG0206eggNOG:ENOG410IEJ4EMBL:AB052757EMBL:AC006921EMBL:AF089738EMBL:AY050844
EMBL:AY091183EMBL:CP002685EnsemblPlants:AT2G36250EnsemblPlants:AT2G36250.1EnsemblPlants:AT2G36250.2entrez:818197Gene3D:3.30.1330.20
Gene3D:3.40.50.1440GeneID:818197Genevisible:O82533GO:GO:0003924GO:GO:0005525GO:GO:0009507GO:GO:0009534
GO:GO:0009535GO:GO:0009570GO:GO:0010020GO:GO:0043621Gramene:AT2G36250.1Gramene:AT2G36250.2HAMAP:MF_00909
hmmpanther:PTHR30314hmmpanther:PTHR30314:SF13HOGENOM:HOG000049094InParanoid:O82533IntAct:O82533InterPro:IPR000158InterPro:IPR003008
InterPro:IPR008280InterPro:IPR018316InterPro:IPR020805InterPro:IPR024757KEGG:ath:AT2G36250KO:K03531OMA:AQVIWGI
PaxDb:O82533Pfam:O82533Pfam:PF00091Pfam:PF12327PhylomeDB:O82533PIR:E84778PIR:JC7770
PRIDE:O82533PRINTS:PR00423PRO:PR:O82533PROSITE:PS01135ProteinModelPortal:O82533Proteomes:UP000006548RefSeq:NP_565839.1
RefSeq:NP_973612.1scanprosite:PS01135SMART:SM00864SMART:SM00865SMR:O82533STRING:3702.AT2G36250.1SUPFAM:SSF52490
SUPFAM:SSF55307TAIR:AT2G36250tair10-symbols:ATFTSZ2-1tair10-symbols:FTSZ2-1TIGRfam:TIGR00065TIGRFAMs:TIGR00065UniGene:At.14112
UniProt:O82533
Coordinates (TAIR10) chr2:-:15197661..15199932
Molecular Weight (calculated) 50724.60 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.09
Length 478 amino acids
Sequence (TAIR10)
(BLAST)
001: MATYVSPCFT PSDSRLLTVL RKNVLPENHL GRLNSIRTID SKKNRVVVAA QKSESSPIRN SPRHYQSQAQ DPFLNLHPEI SMLRGEGTST IVNPRKETSS
101: GPVVEDFEEP SAPSNYNEAR IKVIGVGGGG SNAVNRMIES EMSGVEFWIV NTDIQAMRMS PVLPDNRLQI GKELTRGLGA GGNPEIGMNA ARESKEVIEE
201: ALYGSDMVFV TAGMGGGTGT GAAPVIAGIA KAMGILTVGI ATTPFSFEGR RRTVQAQEGL ASLRDNVDTL IVIPNDKLLT AVSQSTPVTE AFNLADDILR
301: QGVRGISDII TIPGLVNVDF ADVRAIMANA GSSLMGIGTA TGKSRARDAA LNAIQSPLLD IGIERATGIV WNITGGSDLT LFEVNAAAEV IYDLVDPTAN
401: LIFGAVVDPA LSGQVSITLI ATGFKRQEEG EGRTVQMVQA DAASVGATRR PSSSFRESGS VEIPEFLKKK GSSRYPRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)