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AT2G03310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.929
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G03310EnsemblPlants:AT2G03310.1entrez:814860GeneID:814860GO:GO:0016021Gramene:AT2G03310.1
hmmpanther:PTHR37206hmmpanther:PTHR37206:SF2KEGG:ath:AT2G03310ncoils:CoilOMA:RCSYLTRPaxDb:F4ISA8PRIDE:F4ISA8
Proteomes:UP000006548RefSeq:NP_178430.2STRING:3702.AT2G03310.1TAIR:AT2G03310TMHMM:TMhelixUniGene:At.26259UniGene:At.41408
UniProt:F4ISA8
Coordinates (TAIR10) chr2:-:1006476..1007089
Molecular Weight (calculated) 20876.50 Da
IEP (calculated) 10.71
GRAVY (calculated) -0.33
Length 176 amino acids
Sequence (TAIR10)
(BLAST)
001: MNRAEAEQEE EFSEWVVVIQ TSPKSPRTDA STPPNSPILQ PSHRRENPTI NDDDEDSVVP STVNLWLPWR VIETTKKRLI KNSVCIFQAV ERVRCSYLTR
101: KRVFWSLTII GGFSLVLSLV YVKLVRWWRR LHEEKLRFLL LLLREKDQRI KELMVEIGRL NELLSSRRRV RVVRIV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)