AT1G76730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NagB/RpiA/CoA transferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28803033..28804703 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39561.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.97 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||
| Length | 354 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIRLSPGFAI NPRFRSDSFV NSQKPPFLSV QIGSQRRNLS RIGSENGDGV AFDAVAYEAD RLSLDAAAME DMAETAKKEL ESDPDSDPKA WKWVIRKKMW 101: DLMEARNYAM SPRPVHHRIP NFVGASAAAR KLAELDAFRM AMVVKVNPDS PQKQIRFLTL SGEKKLLTPQ PRLRTGFFSV LESDLLKPET IMEACTSVGV 201: AKYGRAIGLD EKIKVDLIVI GSVAVNPQTG ARLGKGEGFA ELEYGMLRYM GAIDDSTPVV TTVHDCQLVD DIPLEKLAIH DVPVDIICTP TRVIFTNTPI 301: PKPQGIYWDK LSPEKLRQIR ILRELKNRLE KKTGRKLPTG PSEKLPPTAE RKRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)