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AT1G76550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphofructokinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76550-MONOMERBioGrid:29207eggNOG:COG0205eggNOG:KOG2440EMBL:AC015450EMBL:AK222118EMBL:AK229451
EMBL:CP002684EnsemblPlants:AT1G76550EnsemblPlants:AT1G76550.1entrez:843988Gene3D:1.10.10.480GeneID:843988Genevisible:Q9C9K3
GO:GO:0003872GO:GO:0005524GO:GO:0005829GO:GO:0015979GO:GO:0046835GO:GO:0046872GO:GO:0047334
Gramene:AT1G76550.1gramene_pathway:2.7.1.90gramene_pathway:PWY-1042HAMAP:MF_01980hmmpanther:PTHR13697hmmpanther:PTHR13697:SF1HOGENOM:HOG000017164
InParanoid:Q9C9K3InterPro:IPR000023InterPro:IPR011183InterPro:IPR013981KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11
KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11KEGG:ath:AT1G76550KO:K00895OMA:DAHIIARPaxDb:Q9C9K3Pfam:PF00365
Pfam:Q9C9K3PhylomeDB:Q9C9K3PIR:E96793PIRSF:PIRSF005677PRIDE:Q9C9K3PRO:PR:Q9C9K3ProteinModelPortal:Q9C9K3
Proteomes:UP000006548RefSeq:NP_177781.1SMR:Q9C9K3STRING:3702.AT1G76550.1SUPFAM:SSF53784TAIR:AT1G76550TIGRfam:TIGR02477
TIGRFAMs:TIGR02477UniGene:At.23436UniGene:At.67125UniPathway:UPA00109UniProt:Q9C9K3
Coordinates (TAIR10) chr1:-:28722900..28726929
Molecular Weight (calculated) 67562.30 Da
IEP (calculated) 7.24
GRAVY (calculated) -0.12
Length 617 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)