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AT1G61500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16356755 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61490.1); Has 123382 Blast hits to 121623 proteins in 4622 species: Archae - 108; Bacteria - 13648; Metazoa - 45596; Fungi - 10441; Plants - 35145; Viruses - 425; Other Eukaryotes - 18019 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G61500-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IH0TEMBL:AC005850EMBL:CP002684EnsemblPlants:AT1G61500
EnsemblPlants:AT1G61500.1entrez:842444Gene3D:2.60.120.200Gene3D:2.90.10.10GeneID:842444Genevisible:Q9SYA0GO:GO:0004674
GO:GO:0005516GO:GO:0005524GO:GO:0005886GO:GO:0016021GO:GO:0030246GO:GO:0048544Gramene:AT1G61500.1
hmmpanther:PTHR27002hmmpanther:PTHR27002:SF84HOGENOM:HOG000116559InParanoid:Q9SYA0InterPro:IPR000719InterPro:IPR000858InterPro:IPR001245
InterPro:IPR001480InterPro:IPR003609InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441InterPro:IPR021820
InterPro:IPR024171iPTMnet:Q9SYA0KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT1G61500OMA:IPFMDESPaxDb:Q9SYA0
Pfam:PF00954Pfam:PF01453Pfam:PF07714Pfam:PF08276Pfam:PF11883Pfam:Q9SYA0Pfscan:PS50011
Pfscan:PS50927Pfscan:PS50948PhylomeDB:Q9SYA0PIR:B96640PIRSF:PIRSF000641PRIDE:Q9SYA0PRO:PR:Q9SYA0
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50927PROSITE:PS50948ProteinModelPortal:Q9SYA0Proteomes:UP000006548
RefSeq:NP_564777.1scanprosite:PS00107scanprosite:PS00108SMART:SM00108SMART:SM00220SMART:SM00473SMR:Q9SYA0
STRING:3702.AT1G61500.1SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT1G61500TMHMM:TMhelixUniGene:At.52308UniProt:Q9SYA0
Coordinates (TAIR10) chr1:-:22689729..22692881
Molecular Weight (calculated) 90335.80 Da
IEP (calculated) 6.46
GRAVY (calculated) -0.21
Length 804 amino acids
Sequence (TAIR10)
(BLAST)
001: MMTRFACLHL FTMFLFTLLS GSSSAVITTE SPLSMGQTLS SANEVYELGF FSPNNTQDQY VGIWFKDTIP RVVVWVANRE KPVTDSTAYL AISSSGSLLL
101: LNGKHGTVWS SGVTFSSSGC RAELSDSGNL KVIDNVSERA LWQSFDHLGD TLLHTSSLTY NLATAEKRVL TSWKSYTDPS PGDFLGQITP QVPSQGFVMR
201: GSTPYWRSGP WAKTRFTGIP FMDESYTGPF TLHQDVNGSG YLTYFQRDYK LSRITLTSEG SIKMFRDNGM GWELYYEAPK KLCDFYGACG PFGLCVMSPS
301: PMCKCFRGFV PKSVEEWKRG NWTGGCVRHT ELDCLGNSTG EDADDFHQIA NIKPPDFYEF ASSVNAEECH QRCVHNCSCL AFAYIKGIGC LVWNQDLMDA
401: VQFSATGELL SIRLARSELD GNKRKKTIVA SIVSLTLFMI LGFTAFGVWR CRVEHIAHIS KDAWKNDLKP QDVPGLDFFD MHTIQNATNN FSLSNKLGQG
501: GFGSVYKGKL QDGKEIAVKR LSSSSGQGKE EFMNEIVLIS KLQHRNLVRV LGCCIEEEEK LLIYEFMVNK SLDTFLFDSR KRLEIDWPKR FDIIQGIARG
601: LLYLHHDSRL RVIHRDLKVS NILLDEKMNP KISDFGLARM YQGTEYQDNT RRVVGTLGYM SPEYAWTGMF SEKSDIYSFG VLMLEIISGE KISRFSYGVE
701: GKTLIAYAWE SWSEYRGIDL LDQDLADSCH PLEVGRCIQI GLLCVQHQPA DRPNTLELLA MLTTTSDLPS PKQPTFAFHT RDDESLSNDL ITVNGMTQSV
801: ILGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)