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AT1G32200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phospholipid/glycerol acyltransferase family protein
Curator
Summary (TAIR10)
Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.
Computational
Description (TAIR10)
ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1133-MONOMERBioCyc:MetaCyc:AT1G32200-MONOMEREC:2.3.1.15eggNOG:ENOG410IIVCeggNOG:ENOG410YK2CEMBL:AC084165EMBL:AY093169
EMBL:BT008758EMBL:CP002684EMBL:D00672EMBL:D00673EnsemblPlants:AT1G32200EnsemblPlants:AT1G32200.1EnsemblPlants:AT1G32200.2
entrez:840112Gene3D:1.10.1200.50GeneID:840112Genevisible:Q43307GO:GO:0004366GO:GO:0006655GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0016024Gramene:AT1G32200.1Gramene:AT1G32200.2gramene_pathway:2.3.1.15gramene_pathway:PWY-5667
gramene_pathway:PWY0-1319gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR35695hmmpanther:PTHR35695:SF1HOGENOM:HOG000264571InParanoid:Q43307InterPro:IPR002123
InterPro:IPR016222InterPro:IPR023083KEGG:00561+2.3.1.15KEGG:00564+2.3.1.15KEGG:ath:AT1G32200KO:K00630OMA:EWYPAPF
PaxDb:Q43307Pfam:PF01553Pfam:PF14829Pfam:Q43307PhylomeDB:Q43307PIR:E86446PIR:S31083
PIRSF:PIRSF000431PRIDE:Q43307PRO:PR:Q43307ProteinModelPortal:Q43307Proteomes:UP000006548RefSeq:NP_174499.1RefSeq:NP_849738.1
SMART:SM00563SMR:Q43307STRING:3702.AT1G32200.1SUPFAM:0039877TAIR:AT1G32200tair10-symbols:ACT1tair10-symbols:ATS1
UniGene:At.16836UniPathway:UPA00557UniProt:Q43307
Coordinates (TAIR10) chr1:-:11602223..11605001
Molecular Weight (calculated) 50423.90 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.25
Length 459 amino acids
Sequence (TAIR10)
(BLAST)
001: MTLTFSSSAA TVAVAAATVT SSARVPVYPL ASSTLRGLVS FRLTAKKLFL PPLRSRGGVS VRAMSELVQD KESSVAASIA FNEAAGETPS ELSHSRTFLD
101: ARSEQDLLSG IKKEAEAGRL PANVAAGMEE LYWNYKNAVL SSGASRADET VVSNMSVAFD RMLLGVEDPY TFNPYHKAVR EPFDYYMFVH TYIRPLIDFK
201: NSYVGNASIF SELEDKIRQG HNIVLISNHQ SEADPAVISL LLEAQSPFIG ENIKCVAGDR VITDPLCKPF SMGRNLICVY SKKHMNDDPE LVDMKRKANT
301: RSLKEMATML RSGGQLIWIA PSGGRDRPNP STGEWFPAPF DASSVDNMRR LVEHSGAPGH IYPMSLLCYD IMPPPPQVEK EIGEKRLVGF HGTGLSIAPE
401: INFSDVTADC ESPNEAKEAY SQALYKSVNE QYEILNSAIK HRRGVEASTS RVSLSQPWN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)