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AT1G31860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : histidine biosynthesis bifunctional protein (HISIE)
Curator
Summary (TAIR10)
encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.
Computational
Description (TAIR10)
AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G31860-MONOMERBioCyc:MetaCyc:AT1G31860-MONOMERBRENDA:3.5.4.19EC:3.5.4.19EC:3.6.1.31eggNOG:COG0139eggNOG:KOG4311
EMBL:AB006082EMBL:AB006083EMBL:AC079041EMBL:AY046000EMBL:AY079376EMBL:AY086514EMBL:CP002684
EnsemblPlants:AT1G31860EnsemblPlants:AT1G31860.1entrez:840076GeneID:840076Genevisible:O82768GO:GO:0000105GO:GO:0004635
GO:GO:0004636GO:GO:0005524GO:GO:0009507GO:GO:0009570Gramene:AT1G31860.1gramene_pathway:3.5.4.19gramene_pathway:3.6.1.31
gramene_pathway:HISTSYN-PWYgramene_plant_reactome:1119509gramene_plant_reactome:6874537gramene_plant_reactome:6875085HAMAP:MF_01019hmmpanther:PTHR21256hmmpanther:PTHR21256:SF3
HOGENOM:HOG000277503InParanoid:O82768InterPro:IPR002496InterPro:IPR008179InterPro:IPR021130InterPro:IPR023019KEGG:00340+3.5.4.19
KEGG:00340+3.6.1.31KEGG:00340+3.6.1.31+3.5.4.19KEGG:ath:AT1G31860KO:K11755OMA:RSTLWTKPaxDb:O82768Pfam:O82768
Pfam:PF01502Pfam:PF01503PhylomeDB:O82768PIR:T51812PRIDE:O82768PRO:PR:O82768ProDom:PD002610
ProteinModelPortal:O82768Proteomes:UP000006548RefSeq:NP_174469.1SMR:O82768STRING:3702.AT1G31860.1SUPFAM:0051606SUPFAM:SSF101386
SwissPalm:O82768TAIR:AT1G31860tair10-symbols:AT-IEtair10-symbols:HISN2TIGRfam:TIGR03188TIGRFAMs:TIGR03188UniGene:At.228
UniPathway:UPA00031UniProt:O82768
Coordinates (TAIR10) chr1:-:11434250..11436530
Molecular Weight (calculated) 31669.40 Da
IEP (calculated) 5.95
GRAVY (calculated) -0.46
Length 281 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSYNALAQ SLARSSCFIP KPYSFRDTKL RSRSNVVFAC NDNKNIALQA KVDNLLDRIK WDDKGLAVAI AQNVDTGAVL MQGFVNREAL STTISSRKAT
101: FFSRSRSTLW TKGETSNNFI NILDVYVDCD RDSIIYLGTP DGPTCHTGEE TCYYTSVFDQ LNNDEASGNK LALTTLYSLE SIISKRKEES TVPQEGKPSW
201: TRRLLTDDAL LCSKIREEAD ELCRTLEDNE EVSRTPSEMA DVLYHAMVLL SKRGVKMEDV LEVLRKRFSQ SGIEEKQNRT K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)