AT4G24810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.556 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1); Has 9358 Blast hits to 9339 proteins in 1786 species: Archae - 124; Bacteria - 4346; Metazoa - 407; Fungi - 488; Plants - 713; Viruses - 14; Other Eukaryotes - 3266 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12786791..12789352 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49344.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.51 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||
| Length | 438 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNFVKDVNKH EEMWERQHEL AAHKVYSMCS DLGGFFLKIA QILGKPDLAP AAWVRKLVTL CDQAPATPFD AVRVVLEKEL GKSIEQVFET FDEKPLGSAS 101: IAQVHRARVK GDKRDVVVKV QHPGVEKLMM VDIRNLQIFA LYMQKTDIKF DLFSMTKEIE KQIGYEFDFK REANAMEKIR RFLYDNNRKS PVLVPRVFPN 201: LVTRKVLVME FMNGIPILSL GDEMAKRGIN PHGKMAEAAK FNILHSLSQA YGQMILKSGF FHADPHPGNI LIGKGSEVAL LDYGQVKELP DHLRLGYANL 301: VIAIADNNAS LALQSFRELG IATVAKCKNE QQELLQLAKT MFDTEMPPGT TTLQPFSEDS SIKKISVEAF PEELFSVLRT VVLLRGLSVG IGINYSCAQH 401: WRAMAEEALH ASGRLSTGRK QKRRCSSLRR LYPGPRES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)