AT4G23020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1); Has 146 Blast hits to 146 proteins in 40 species: Archae - 0; Bacteria - 16; Metazoa - 17; Fungi - 4; Plants - 67; Viruses - 20; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12066331..12068442 | ||||||||||||||||
| Molecular Weight (calculated) | 49083.50 Da | ||||||||||||||||
| IEP (calculated) | 4.86 | ||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||
| Length | 425 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSISSSDHP LPVSKKRLKP LILRDFLLDD LSSCSSNGFK SFPRLLNAEI QRSGMFHHNR RITCGLAFSH AVHKASTALL TAVKLLPFPS SVKSQSRDRD 101: NKKGLFSRSF WKKLSRRELN VDVGEKERRT DDREEEIQRC RSFAEFLQES QDQLSDQIYY ISPTDLFSGE ATLSKDAVGD SSSFSSEDSE VTQSSSGVIV 201: VMMSGDCVGS HVSDGSSLND NTEECENEEK EQLSPISILD CPFQDDAISP PSHHKETYEK KQMRKRRRLE SLVRLEPVDL EKRIEKYEER QDYKSHIIEI 301: EEDQSEIRAN RLFALVKSRI IEEQNQLLAS HVVDNVLLDF FKENNNNETR DEDKLVEIVE EWVMRRQDDE YNMFMSWKVS EKREIYVKEM KWGCINGDEK 401: EYVVEELGNG FLTSLVDELI HDISL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)