AT3G62740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta glucosidase 7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta glucosidase 7 (BGLU7); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 8 (TAIR:AT3G62750.1); Has 11088 Blast hits to 10758 proteins in 1457 species: Archae - 142; Bacteria - 7659; Metazoa - 701; Fungi - 202; Plants - 1433; Viruses - 0; Other Eukaryotes - 951 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:23211416..23213888 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56420.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.98 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 502 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKPFSQFFVF VVTVSATSYI DAFTRNDFPN DFLFGAATSA YQWEGAFDED GKSPSVWDTT SHCDSGSNNG DIACDGYHKY KEDVMLMAEM GLESFRFSIS 101: WSRLIPNGRG RINPKGLLFY KNLIKELRSH GIEPQVTLYH YDLPQSLEDE YGGWINRKII EDFTAFADVC FREFGEDVKL WTKINEATLF AIGSYGDGMR 201: YGHCPPMNYS TANVCTETYI AGHNMLLAHS SASNLYKLKY KTKQRGSVGL SIYAYGLSPY TDSKDDETAT ERAEAFLFGW MLKPLVVGDY PDIMKRTLGS 301: RLPVFSEEES KQVKGSSDFV GVVHYNTFYV TNRPAPSLVT SINKLFFADI GAYLIAAGNA SLFEFDAVPW GLEGILQHIK QSYNNPPIYI LENGKPMKHG 401: STLQDTPRAE FIQAYIGAVH NAITNGSDTR GYFVWSMIDL YELIGRYMTS YGMYYVNFSD PGRKRSPKLS ASWYTGFLNG TIDVASQDTI QLQRKCSGSS 501: SL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)