AT1G60630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G10850.1); Has 133252 Blast hits to 101001 proteins in 3013 species: Archae - 74; Bacteria - 10148; Metazoa - 33814; Fungi - 7963; Plants - 65926; Viruses - 266; Other Eukaryotes - 15061 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22334754..22336785 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72377.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 652 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MISSSSCMFF LVFAFFLISP VRSSDVEALL SLKSSIDPSN SIPWRGTDPC NWEGVKKCMK GRVSKLVLEN LNLSGSLNGK SLNQLDQLRV LSFKGNSLSG 101: SIPNLSGLVN LKSLYLNDNN FSGEFPESLT SLHRLKTVVL SRNRFSGKIP SSLLRLSRLY TFYVQDNLFS GSIPPLNQAT LRFFNVSNNQ LSGHIPPTQA 201: LNRFNESSFT DNIALCGDQI QNSCNDTTGI TSTPSAKPAI PVAKTRSRTK LIGIISGSIC GGILILLLTF LLICLLWRRK RSKSKREERR SKRVAESKEA 301: KTAETEEGTS DQKNKRFSWE KESEEGSVGT LVFLGRDITV VRYTMDDLLK ASAETLGRGT LGSTYKAVME SGFIITVKRL KDAGFPRMDE FKRHIEILGR 401: LKHPNLVPLR AYFQAKEECL LVYDYFPNGS LFSLIHGSKV SGSGKPLHWT SCLKIAEDLA MGLVYIHQNP GLTHGNLKSS NVLLGPDFES CLTDYGLSDL 501: HDPYSIEDTS AASLFYKAPE CRDLRKASTQ PADVYSFGVL LLELLTGRTS FKDLVHKYGS DISTWVRAVR EEETEVSEEL NASEEKLQAL LTIATACVAV 601: KPENRPAMRE VLKMVKDARA EAALFSFNSS DHSPGRWSDT IQSLPREDHM SI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)