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AT1G63700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.
Computational
Description (TAIR10)
YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G63700-MONOMERBioGrid:27895DIP:DIP-59652NEC:2.7.11.25eggNOG:ENOG410XQGSeggNOG:KOG0198EMBL:AC011622
EMBL:AY357947EMBL:AY357948EMBL:AY357949EMBL:CP002684EnsemblPlants:AT1G63700EnsemblPlants:AT1G63700.1entrez:842674
GeneID:842674Genevisible:Q9CAD5GO:GO:0004674GO:GO:0004709GO:GO:0005524GO:GO:0005737GO:GO:0007346
GO:GO:0010098GO:GO:0010103GO:GO:0010229GO:GO:0023014GO:GO:0031098GO:GO:0032147GO:GO:0040008
Gramene:AT1G63700.1hmmpanther:PTHR24361hmmpanther:PTHR24361:SF253HOGENOM:HOG000083183InParanoid:Q9CAD5InterPro:IPR000719InterPro:IPR011009
InterPro:IPR017441iPTMnet:Q9CAD5KEGG:ath:AT1G63700OMA:FGENAIRPaxDb:Q9CAD5Pfam:PF00069Pfam:Q9CAD5
Pfscan:PS50011PhylomeDB:Q9CAD5PIR:A96662PRIDE:Q9CAD5PRO:PR:Q9CAD5PROSITE:PS00107PROSITE:PS50011
ProteinModelPortal:Q9CAD5Proteomes:UP000006548RefSeq:NP_176557.1scanprosite:PS00107SMART:SM00220SMR:Q9CAD5STRING:3702.AT1G63700.1
SUPFAM:SSF56112TAIR:AT1G63700tair10-symbols:EMB71tair10-symbols:MAPKKK4tair10-symbols:YDAUniGene:At.21875UniProt:Q9CAD5
Coordinates (TAIR10) chr1:-:23625208..23629031
Molecular Weight (calculated) 95939.80 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.63
Length 883 amino acids
Sequence (TAIR10)
(BLAST)
001: MPWWSKSKDE KKKTNKESII DAFNRKLGFA SEDRSSGRSR KSRRRRDEIV SERGAISRLP SRSPSPSTRV SRCQSFAERS PAVPLPRPIV RPHVTSTDSG
101: MNGSQRPGLD ANLKPSWLPL PKPHGATSIP DNTGAEPDFA TASVSSGSSV GDIPSDSLLS PLASDCENGN RTPVNISSRD QSMHSNKNSA EMFKPVPNKN
201: RILSASPRRR PLGTHVKNLQ IPQRDLVLCS APDSLLSSPS RSPMRSFIPD QVSNHGLLIS KPYSDVSLLG SGQCSSPGSG YNSGNNSIGG DMATQLFWPQ
301: SRCSPECSPV PSPRMTSPGP SSRIQSGAVT PLHPRAGGST TGSPTRRLDD NRQQSHRLPL PPLLISNTCP FSPTYSAATS PSVPRSPARA EATVSPGSRW
401: KKGRLLGMGS FGHVYLGFNS ESGEMCAMKE VTLCSDDPKS RESAQQLGQE ISVLSRLRHQ NIVQYYGSET VDDKLYIYLE YVSGGSIYKL LQEYGQFGEN
501: AIRNYTQQIL SGLAYLHAKN TVHRDIKGAN ILVDPHGRVK VADFGMAKHI TAQSGPLSFK GSPYWMAPEV IKNSNGSNLA VDIWSLGCTV LEMATTKPPW
601: SQYEGVPAMF KIGNSKELPD IPDHLSEEGK DFVRKCLQRN PANRPTAAQL LDHAFVRNVM PMERPIVSGE PAEAMNVASS TMRSLDIGHA RSLPCLDSED
701: ATNYQQKGLK HGSGFSISQS PRNMSCPISP VGSPIFHSHS PHISGRRSPS PISSPHALSG SSTPLTGCGG AIPFHHQRQT TVNFLHEGIG SSRSPGSGGN
801: FYTNSFFQEP SRQQDRSRSS PRTPPHVFWD NNGSIQPGYN WNKDNQPVLS DHVSQQLLSE HLKLKSLDLR PGFSTPGSTN RGP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)