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ATMG01190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : ATP synthase subunit 1
Curator
Summary (TAIR10)
ATPase subunit 1
Computational
Description (TAIR10)
ATP synthase subunit 1 (ATP1); FUNCTIONS IN: copper ion binding, cobalt ion binding, zinc ion binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: cotyledon, guard cell, seed, leaf; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1).
Protein Annotations
eggNOG:COG0056eggNOG:KOG1353EMBL:JF729202EnsemblPlants:ATMG01190
EnsemblPlants:ATMG01190.1entrez:3890462Gene3D:2.40.30.20Gene3D:3.40.50.300
GeneID:3890462GO:GO:0005524GO:GO:0005739GO:GO:0015986
GO:GO:0015991GO:GO:0045261GO:GO:0046933GO:GO:0046961
Gramene:ATMG01190.1HAMAP:MF_01346hmmpanther:PTHR15184hmmpanther:PTHR15184:SF3
InterPro:IPR000194InterPro:IPR000793InterPro:IPR004100InterPro:IPR005294
InterPro:IPR020003InterPro:IPR023366InterPro:IPR027417KEGG:00190+3.6.3.14
KEGG:ath:ArthMp100KO:K02132ncoils:CoilOMA:QPMSISE
PANTHER:PTHR15184:SF3PaxDb:G1C2Z0Pfam:PF00006Pfam:PF00306
Pfam:PF02874PIRSF:PIRSF039088PRIDE:G1C2Z0PROSITE:PS00152
ProteinModelPortal:G1C2Z0RefSeq:NP_085571.2scanprosite:PS00152STRING:3702.ATMG01190.1
SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540tair10-symbols:ATP1
TIGRfam:TIGR00962TIGRFAMs:TIGR00962UniProt:G1C2Z0
Coordinates (TAIR10) chrM:-:302166..303689
Molecular Weight (calculated) 54974.50 Da
IEP (calculated) 6.55
GRAVY (calculated) -0.07
Length 507 amino acids
Sequence (TAIR10)
(BLAST)
001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)