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ATMG00410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : ATPase subunit 6-1
Curator
Summary (TAIR10)
ATPase subunit 6
Computational
Description (TAIR10)
ATPase subunit 6-1 (ATP6-1); CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568); BEST Arabidopsis thaliana protein match is: ATPase, F0 complex, subunit A protein (TAIR:AT2G07741.1).
Protein Annotations
eggNOG:COG0356eggNOG:KOG4665EMBL:AC006225EMBL:CP002685
EMBL:EF488888EMBL:EF488889EMBL:JF729200EMBL:JF729201
EMBL:JF729202EMBL:Y08501EnsemblPlants:AT2G07741.1EnsemblPlants:ATMG00410
EnsemblPlants:ATMG00410.1entrez:814588entrez:815413Gene3D:1.20.120.220
GeneID:814588GeneID:815413Genevisible:P93298GO:GO:0005743
GO:GO:0015078GO:GO:0015986GO:GO:0016021GO:GO:0045263
Gramene:AT2G07741.1Gramene:ATMG00410.1HAMAP:MF_01393hmmpanther:PTHR11410
hmmpanther:PTHR11410:SF0HOGENOM:HOG000253874InParanoid:P93298IntAct:P93298
InterPro:IPR000568InterPro:IPR023011KEGG:ath:ArthMp035KEGG:ath:AT2G07741
KO:K02126PANTHER:PTHR11410PaxDb:P93298Pfam:P93298
Pfam:PF00119PhylomeDB:P93298PRINTS:PR00123PRO:PR:P93298
PROSITE:PS00449ProteinModelPortal:P93298Proteomes:UP000006548RefSeq:NP_085503.1
RefSeq:NP_178810.1scanprosite:PS00449STRING:3702.ATMG00410.1SUPFAM:0035809
SUPFAM:SSF81336TAIR:ATMG00410tair10-symbols:ATP6tair10-symbols:ATP6-1
TIGRfam:TIGR01131TIGRFAMs:TIGR01131TMHMM:TMhelixUniGene:At.70276
UniProt:P93298
Coordinates (TAIR10) chrM:+:111750..112907
Molecular Weight (calculated) 42354.90 Da
IEP (calculated) 4.41
GRAVY (calculated) 0.64
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MRRIFLFDEN SLNSSSTIDT SSASTIDTSF ASQCTNFSSG QASGTQDTHA GIFEDCPGLN PNDERVVELQ CEIREKCEAL TQDPEMGLIL GEALHAESDN
101: VPFLQSIADD LTQNGVSGEA FQEALNIVGQ AAASPLDQFE IVPLIPMHIG NFYFSFTNPS LFMLLTLSFF LLLIHFVTKK GGGNLVPNAW QSLVELLYDF
201: VLNLVKEQIG GLSGNVKQMF FPCILVTFLF LLFCNLQGMI PYSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS
301: YCFRALSLGI RLFANMMAGH SLVKILSGFA WTMLCMNDIF YFIGALGPLF IVLALTGLEL GVAILQAYVF TILICIYLND AINLH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)