suba logo
AT5G67600.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AB013390EMBL:AY040021EMBL:AY114014EMBL:CP002688
EnsemblPlants:AT5G67600EnsemblPlants:AT5G67600.1entrez:836896GeneID:836896
GO:GO:0005886GO:GO:0009554Gramene:AT5G67600.1hmmpanther:PTHR31568
hmmpanther:PTHR31568:SF3InterPro:IPR028144KEGG:ath:AT5G67600OMA:QKQNAGM
Pfam:PF12734Proteomes:UP000006548RefSeq:NP_569052.1STRING:3702.AT5G67600.1
TAIR:AT5G67600UniGene:At.7638UniProt:Q9FJW3
Coordinates (TAIR10) chr5:-:26959754..26960226
Molecular Weight (calculated) 8711.29 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.60
Length 82 amino acids
Sequence (TAIR10)
(BLAST)
1: MYHQEQHPVG APPPQGYPPK DGYPPAGYPP AGYPPPGYAQ GYPAQGYPPP QYSQAPQQKQ NAGMLEGCLA ALCCCCLLDA CF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)