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AT5G67180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : target of early activation tagged (EAT) 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
target of early activation tagged (EAT) 3 (TOE3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G36920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410II4NeggNOG:ENOG410YD13EMBL:AB020742EMBL:AK176145EMBL:AY088238EMBL:BT029206EMBL:CP002688
EnsemblPlants:AT5G67180EnsemblPlants:AT5G67180.1entrez:836853Gene3D:3.30.730.10GeneID:836853Genevisible:Q9FH95GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0007275GO:GO:0009873Gramene:AT5G67180.1hmmpanther:PTHR32467
hmmpanther:PTHR32467:SF18HOGENOM:HOG000033977InterPro:IPR001471InterPro:IPR016177InterPro:IPR031112KEGG:ath:AT5G67180KO:K09284
OMA:PDHHEESPANTHER:PTHR32467PaxDb:Q9FH95Pfam:PF00847Pfam:Q9FH95Pfscan:PS51032PhylomeDB:Q9FH95
PRIDE:Q9FH95PRINTS:PR00367PRO:PR:Q9FH95PROSITE:PS51032ProteinModelPortal:Q9FH95Proteomes:UP000006548RefSeq:NP_201519.1
SMART:SM00380SMR:Q9FH95STRING:3702.AT5G67180.1SUPFAM:SSF54171TAIR:AT5G67180tair10-symbols:TOE3UniGene:At.28821
UniGene:At.28822UniProt:Q9FH95
Coordinates (TAIR10) chr5:-:26802119..26803934
Molecular Weight (calculated) 39596.10 Da
IEP (calculated) 8.99
GRAVY (calculated) -0.79
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MWNLNDSPDH HEESDSRGNP VGHVSNGMSQ SATWLPFVLP VTRNFFPAQS MEPGVRWSGF NSVGKSDPSG SGRPEEPEIS PPIKKSRRGP RSRSSQYRGV
101: TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FDIEDYLDDL KQMGNLTKEE FMHVLRRQST GFPRGSSKYR GVTLHKCGRW
201: ESRLGQFLNK KYVYLGLFDT EIEAARAYDK AAIKCNGKDA VTNFDPKVYE EEEDLSSETT RNGHNLGLSL GESSSEEFRL KSDIASIRSR IRDEERLLGS
301: DLSLAMMTTT VRSEKQQSDG GGNRVVGMAA SSGFSPQPSP YRIPRTFHFS RP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)