AT5G67090.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.998 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G14240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:26774111..26776321 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79781.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.32 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 736 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGMTVVIILV FSFFVAIVTA ETSPYIIHMD LSAKPLPFSD HRSWFSTTLT SVITNRKPKI IYAYTDSVHG FSAVLTNSEL QRLKHKPGYV SFTKDLPVKL 101: HTTFSPKFIG LNSTSGTWPV SNYGAGIVIG IIDTGIWPDS PSFHDDGVGS VPSKWKGACE FNSSSLCNKK LIGAKVFNKG LFANNPDLRE TKIGQYSSPY 201: DTIGHGTHVA AIAAGNHVKN ASYFSYAQGT ASGIAPHAHL AIYKAAWEEG IYSSDVIAAI DQAIRDGVHV ISLSLGLSFE DDDDNDGFGL ENDPIAVASF 301: AAIQKGVFVV TSGGNDGPYY WSLINGAPWI MTVGAGTIGR QFQGTLTFGN RVSFSFPSLF PGEFPSVQFP VTYIESGSVE NKTLANRIVV CNENINIGSK 401: LHQIRSTGAA AVVLITDKLL EEQDTIKFQF PVAFIGSKHR ETIESYASSN KNNATAKLEF RKTVIGTKPA PEVGTYSSRG PFTSFPQILK PDILAPGTLI 501: LSAWPSVEQI TGTRALPLFS GFNLLTGTSM AAPHVAGVAA LIKQVHPNWS PSAIKSAIMT TALTLDNPLA VGAGHVSTNK VLNPGLIYDT TPQDFINFLC 601: HEAKQSRKLI NIITRSNISD ACKKPSPYLN YPSIIAYFTS DQSSPKIFKR TLTNVGEAKR SYIVRVRGLK GLNVVVEPKK LMFSEKNEKL SYTVRLESPR 701: GLQENVVYGL VSWVDEDEAE FEVSCSVVAT SLVQES |
||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)