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AT5G66950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.900
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G23520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0520eggNOG:KOG2142EMBL:AB026640EMBL:CP002688
EnsemblPlants:AT5G66950EnsemblPlants:AT5G66950.1entrez:836829Gene3D:3.40.640.10
GeneID:836829GO:GO:0003824GO:GO:0005886GO:GO:0009536
Gramene:AT5G66950.1hmmpanther:PTHR14237hmmpanther:PTHR14237:SF31HOGENOM:HOG000240438
InterPro:IPR015421InterPro:IPR015424KEGG:ath:AT5G66950OMA:LSVSHEV
PhylomeDB:Q9FGD5Proteomes:UP000006548RefSeq:NP_201496.1STRING:3702.AT5G66950.1
SUPFAM:SSF53383TAIR:AT5G66950UniGene:At.26471UniProt:Q9FGD5
Coordinates (TAIR10) chr5:+:26733333..26735945
Molecular Weight (calculated) 97354.10 Da
IEP (calculated) 5.21
GRAVY (calculated) -0.52
Length 870 amino acids
Sequence (TAIR10)
(BLAST)
001: MHISLWKPIY HCAAALVLDK KSSGSSSSSS RNRDVTQRKL HESKLREALE QASEDGLLVK SQDMEEEDES QDQILGRSRS LARLNAQREF LRATSLAAQR
101: AFESEETLPE LEEALTIFLT MYPKYQSSEK VDELRNDEYF HLSLPKVCLD YCGFGLFSYL QTVHYWDTCT FSLSEISANL SNHAIYGGAE KGSIEHDIKI
201: RIMDYLNIPE NEYGLVFTVS RGSAFKLLAE SYPFHTNKKL LTMFDHESQS VSWMGQCAKE KGAKVGSAWF KWPTLRLCSM DLKKEILSKK KRKKDSATGL
301: FVFPVQSRVT GSKYSYQWMA LAQQNNWHVL LDAGALGPKD MDSLGLSLFR PDFIITSFYR VFGYDPTGFG CLLIKKSVIS CLQSQSGKTS SGIVKITPEY
401: PLYLSDSMDG LEGLTGIQDN GIAINGDNKA LGTQLPAFSG AYTSAQVQDV FETDMDHEIG SDRDNTSAVF EEAESISVGE LIKSPVFSED ESSDSSLWID
501: LGQSPADSDN AGHLNKQKSP LLVRKNHKRR SSPKPASKAN NGSNGGRHVL SFDAAVLSVS HEVGEEVIEE ENSEMNQIDT SRRLRVTEIE EEEEEGGSSK
601: LTAHANGSSS GIKDSAIRRE TEGEFRLLGR REKSQYNGGR LLVNEDEHPS KRRVSFRSVD HGEASVISLG DEDEEEDGSN GVEWDDDQRE PEIVCRHIDH
701: VNMLGLNKTT SRLRYLINWL VTSLLQLRLP RSDSDGEHKN LVQIYGPKIK YERGSSVAFN IRDLKSGMVH PEIVQKLAER EGISLGIGYL SHIKIIDNRS
801: EDSSSWKPVD REGRNNGFIR VEVVTASLGF LTNFEDVYRL WNFVAKFLSP GFAKQGTLPT VIEEDDSSET
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)