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AT5G66815.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSCUeggNOG:ENOG41108XFEMBL:BT029249EMBL:CP002688
EnsemblPlants:AT5G66815EnsemblPlants:AT5G66815.1entrez:836815GeneID:836815
Gramene:AT5G66815.1hmmpanther:PTHR33348hmmpanther:PTHR33348:SF3HOGENOM:HOG000090622
InterPro:IPR033250KEGG:ath:AT5G66815OMA:NCVHGRTPANTHER:PTHR33348
PhylomeDB:Q058G9Proteomes:UP000006548RefSeq:NP_569039.1TAIR:AT5G66815
TMHMM:TMhelixUniGene:At.28847UniProt:Q058G9
Coordinates (TAIR10) chr5:+:26677471..26677788
Molecular Weight (calculated) 11585.90 Da
IEP (calculated) 7.67
GRAVY (calculated) -0.51
Length 105 amino acids
Sequence (TAIR10)
(BLAST)
001: MESFMGQKKT LYACYFLMLV FFLGFNCVHG RTLKVDDKIN GGHYDSKTMM ALAKHNDMMV DDKAMQFSPP PPPPPPSQSG GKDAEDFRPT TPGHSPGIGH
101: SLSHN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)