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AT5G66720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G66720-MONOMERBioCyc:ARA:GQT-848-MONOMERBioGrid:22047EC:3.1.3.16
eggNOG:COG0631eggNOG:KOG1379EMBL:AB018119EMBL:AK117127
EMBL:AY136405EMBL:BT000228EMBL:BX833253EMBL:CP002688
EnsemblPlants:AT5G66720EnsemblPlants:AT5G66720.1entrez:836805Gene3D:3.60.40.10
GeneID:836805GO:GO:0004721GO:GO:0009507GO:GO:0009570
GO:GO:0046872hmmpanther:PTHR12320hmmpanther:PTHR12320:SF16HOGENOM:HOG000239282
InParanoid:Q9LVQ8IntAct:Q9LVQ8InterPro:IPR001932KEGG:ath:AT5G66720
KO:K17508OMA:HPEKEATPaxDb:Q9LVQ8Pfam:PF13672
Pfam:Q9LVQ8Pfscan:PS51746PhylomeDB:Q9LVQ8PRIDE:Q9LVQ8
PRO:PR:Q9LVQ8PROSITE:PS51746ProteinModelPortal:Q9LVQ8Proteomes:UP000006548
RefSeq:NP_201473.1RefSeq:NP_975004.1SMART:SM00331SMART:SM00332
STRING:3702.AT5G66720.1SUPFAM:SSF81606TAIR:AT5G66720UniGene:At.28853
UniProt:Q9LVQ8
Coordinates (TAIR10) chr5:-:26639015..26640545
Molecular Weight (calculated) 43875.70 Da
IEP (calculated) 7.77
GRAVY (calculated) -0.18
Length 414 amino acids
Sequence (TAIR10)
(BLAST)
001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKSLRL VSGSCYLPHP EKEATGGEDA HFICDEEQAI
201: GVADGVGGWA EVGVNAGLFS RELMSYSVSA IQEQHKGSSI DPLVVLEKAH SQTKAKGSST ACIIVLKDKG LHAINLGDSG FTVVREGTTV FQSPVQQHGF
301: NFTYQLESGN SADVPSSGQV FTIDVQSGDV IVAGTDGVYD NLYNEEITGV VVSSVRAGLD PKGTAQKIAE LARQRAVDKK RQSPFATAAQ EAGYRYYGGK
401: LDDITAVVSY VTSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)