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AT5G66680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Predictors External Curations
AmiGO : endoplasmic reticulum 15860005
AmiGO : endoplasmic reticulum 16618929
TAIR : vacuole 15539469
TAIR : plasma membrane 17151019
TAIR : endoplasmic reticulum 16618929
TAIR : nucleus 15496452
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:32219438 (2020): cytosol
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:16287169 (2006): extracellular region
  • PMID:15574830 (2004): plasma membrane
  • PMID:15496452 (2005): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
Curator
Summary (TAIR10)
Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.
Computational
Description (TAIR10)
DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G66680-MONOMERBioGrid:22043EC:2.4.99.18eggNOG:ENOG410XSF3
eggNOG:KOG2754EMBL:AB018119EMBL:AF428338EMBL:AY034944
EMBL:AY085807EMBL:AY150381EMBL:CP002688EnsemblPlants:AT5G66680
EnsemblPlants:AT5G66680.1entrez:836801GeneID:836801Genevisible:Q944K2
GO:GO:0005730GO:GO:0005773GO:GO:0005774GO:GO:0005783
GO:GO:0005794GO:GO:0008250GO:GO:0009505GO:GO:0009506
GO:GO:0009664GO:GO:0009826GO:GO:0016020GO:GO:0016021
GO:GO:0016757GO:GO:0018279Gramene:AT5G66680.1hmmpanther:PTHR10830
hmmpanther:PTHR10830:SF0HOGENOM:HOG000173744InParanoid:Q944K2InterPro:IPR005013
iPTMnet:Q944K2KEGG:00510+2.4.99.18KEGG:00513+2.4.99.18KEGG:ath:AT5G66680
KO:K12670OMA:AFSMMIGPANTHER:PTHR10830PaxDb:Q944K2
Pfam:PF03345Pfam:Q944K2PhylomeDB:Q944K2PRIDE:Q944K2
PRO:PR:Q944K2Proteomes:UP000006548RefSeq:NP_569038.1STRING:3702.AT5G66680.1
SwissPalm:Q944K2TAIR:AT5G66680tair10-symbols:DGL1TMHMM:TMhelix
UniGene:At.23530UniPathway:UPA00378UniProt:Q944K2
Coordinates (TAIR10) chr5:-:26617840..26620581
Molecular Weight (calculated) 48746.80 Da
IEP (calculated) 6.30
GRAVY (calculated) -0.08
Length 437 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNLSRSVAL ISVFLLPLLS FSFSVDNPTD RRVLVLLDDL SLKSSHSIFF NTLKSRGFDL DFKLAEDSKL ALQRYGQYLY DGLIIFAPST ERFGGSLDSK
101: SIADFVDSGR DLILSADTAA SDLIRGIATE CGVDFDEDSS AMVIDHTSFS VSDVDGDHTL IAADDLVKSD VILGKTKIEA PVLFRGVAHS LNPTNNLVLK
201: VLSASPSAYS ANPSSKLSSP PQLTGSSISL VSVMQARNNA RVVISGSVQL FSDRLIRSGV QKAGSPNQYE KSGNEQFVTE LSKWVFHERG HLKAGNLVHH
301: RVGETDEPAI YRIKDDLEFS VEIYEWSGKS WEPYVANDVQ VQFYMMSPYV LKTLSTDKKG LFHTSFKVPD VYGVFQFKVE YEKLGYTTLS LSKQIPVRPY
401: RHNEYERFIP TAYPYYGACF TTMAGFFVFS FVYLYHK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)