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AT5G66640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.974
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DA1-related protein 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DA1-related protein 3 (DAR3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 235 Blast hits to 233 proteins in 45 species: Archae - 0; Bacteria - 8; Metazoa - 9; Fungi - 11; Plants - 164; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRD4eggNOG:KOG1703EMBL:AB018119EMBL:CP002688EnsemblPlants:AT5G66640EnsemblPlants:AT5G66640.1entrez:836796
ExpressionAtlas:Q9LVR6GeneID:836796Genevisible:Q9LVR6hmmpanther:PTHR24209hmmpanther:PTHR24209:SF13HOGENOM:HOG000239946InParanoid:Q9LVR6
InterPro:IPR022087ncoils:CoilPaxDb:Q9LVR6Pfam:PF12315Pfam:Q9LVR6PhylomeDB:Q9LVR6PRIDE:Q9LVR6
PRO:PR:Q9LVR6PROSITE:PS00142ProteinModelPortal:Q9LVR6Proteomes:UP000006548RefSeq:NP_201465.2SMR:Q9LVR6STRING:3702.AT5G66640.2
TAIR:AT5G66640tair10-symbols:DAR3UniGene:At.28154UniProt:Q9LVR6
Coordinates (TAIR10) chr5:+:26599818..26601765
Molecular Weight (calculated) 51311.30 Da
IEP (calculated) 5.56
GRAVY (calculated) -0.50
Length 450 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRRKRQEED EKIEIERVKE ESLKLAKQAE EKRRLEESKE QGKRIQVDDD QLAKTTSKDK GQINHSKDVV EEDVNPPPSI DGKSEIGDGT SVNPRCLCCF
101: HCHRPFVMHE ILKKGKFHID CYKEYYRNRN CYVCQQKIPV NAEGIRKFSE HPFWKEKYCP IHDEDGTAKC CSCERLEPRG TNYVMLGDFR WLCIECMGSA
201: VMDTNEVQPL HFEIREFFEG LFLKVDKEFA LLLVEKQALN KAEEEEKIDY HRAAVTRGLC MSEEQIVPSI IKGPRMGPDN QLITDIVTES QRVSGFEVTG
301: ILIIYGLPRL LTGYILAHEM MHAWLRLNGY KNLKLELEEG LCQALGLRWL ESQTFASTDA AAAAAVASSS SFSSSTAPPA AITSKKSDDW SIFEKKLVEF
401: CMNQIKEDDS PVYGLGFKQV YEMMVSNNYN IKDTLKDIVS ASNATPDSTV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)