AT5G66640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DA1-related protein 3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DA1-related protein 3 (DAR3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 235 Blast hits to 233 proteins in 45 species: Archae - 0; Bacteria - 8; Metazoa - 9; Fungi - 11; Plants - 164; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:26599818..26601765 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51311.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.56 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||
| Length | 450 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRRKRQEED EKIEIERVKE ESLKLAKQAE EKRRLEESKE QGKRIQVDDD QLAKTTSKDK GQINHSKDVV EEDVNPPPSI DGKSEIGDGT SVNPRCLCCF 101: HCHRPFVMHE ILKKGKFHID CYKEYYRNRN CYVCQQKIPV NAEGIRKFSE HPFWKEKYCP IHDEDGTAKC CSCERLEPRG TNYVMLGDFR WLCIECMGSA 201: VMDTNEVQPL HFEIREFFEG LFLKVDKEFA LLLVEKQALN KAEEEEKIDY HRAAVTRGLC MSEEQIVPSI IKGPRMGPDN QLITDIVTES QRVSGFEVTG 301: ILIIYGLPRL LTGYILAHEM MHAWLRLNGY KNLKLELEEG LCQALGLRWL ESQTFASTDA AAAAAVASSS SFSSSTAPPA AITSKKSDDW SIFEKKLVEF 401: CMNQIKEDDS PVYGLGFKQV YEMMVSNNYN IKDTLKDIVS ASNATPDSTV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)