AT5G66610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.571 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DA1-related protein 7 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 2467 Blast hits to 1764 proteins in 148 species: Archae - 0; Bacteria - 16; Metazoa - 1946; Fungi - 65; Plants - 174; Viruses - 2; Other Eukaryotes - 264 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:26585223..26587755 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64043.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 560 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWCLSCFKPS TKHDPSEDRF EEETNIVTGI SLYEDVILRQ RRSEADQIEW AIQDSFNPQE TSRCRQREED DQIARGLQYV EETELDKSVV DEEDQQLSKI 101: VEESLKEKGK SKQFEDDQVE NDEQQALMVQ ESLYMVELSA QLEEDKNIST IPPLNEDAQL QKVIWESAKG KGQIEHFKDP VEEDGNLPRV DLNVNHPHSI 201: CDGCKSAIEY GRSVHALGVN WHPECFCCRY CDKPIAMHEF SNTKGRCHIT CYERSHPNCH VCKKKFPGRK YKEHPFWKEK YCPFHEVDGT PKCCSCERLE 301: PWGTKYVMLA DNRWLCVKCM ECAVMDTYEC QPLHFEIREF FGSLNMKVEK EFPLLLVEKE ALKKAEAQEK IDNQHGVVTR GICLSEGQIV NSVFKKPTMG 401: PNGELVSLGT EPQKVVGGCE VTAILILYGL PRLLTGYILA HEMMHAWLRL NGYRNLKLEL EEGICQVLGH MWLESQTYSS SAAASSASSS SRTPAANASK 501: KGAQSDYEKK LVEFCKDQIE TDDSPVYGVG FRKVNQMVSD SSLHKILKSI QHWTKPDSNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)