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AT5G66120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 3-dehydroquinate synthase, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity, carbon-oxygen lyase activity, acting on phosphates; INVOLVED IN: aromatic amino acid family biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase (InterPro:IPR016303), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 8426 Blast hits to 8421 proteins in 2521 species: Archae - 162; Bacteria - 5225; Metazoa - 16; Fungi - 182; Plants - 46; Viruses - 2; Other Eukaryotes - 2793 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G66120-MONOMERBioCyc:ARA:GQT-2821-MONOMEREC:4.2.3.4eggNOG:COG0337
eggNOG:ENOG410IRXFEMBL:AB011474EMBL:AY069891EMBL:AY084788
EMBL:AY142020EMBL:CP002688EnsemblPlants:AT5G66120EnsemblPlants:AT5G66120.1
EnsemblPlants:AT5G66120.2entrez:836744ExpressionAtlas:Q8VYV7GeneID:836744
Genevisible:Q8VYV7GO:GO:0003856GO:GO:0005768GO:GO:0005794
GO:GO:0005802GO:GO:0009073GO:GO:0009423GO:GO:0009507
GO:GO:0009570GO:GO:0046872gramene_pathway:4.2.3.4gramene_pathway:ARO-PWY-ARA
gramene_plant_reactome:1119430gramene_plant_reactome:6874689HAMAP:MF_00110hmmpanther:PTHR21090
hmmpanther:PTHR21090:SF13HOGENOM:HOG000007970InParanoid:Q8VYV7InterPro:IPR016037
InterPro:IPR030960iPTMnet:Q8VYV7KEGG:00400+4.2.3.4KEGG:ath:AT5G66120
KO:K01735OMA:IERSCAAPaxDb:Q8VYV7Pfam:PF01761
PhylomeDB:Q8VYV7PRIDE:Q8VYV7PRO:PR:Q8VYV7ProteinModelPortal:Q8VYV7
Proteomes:UP000006548RefSeq:NP_569029.1RefSeq:NP_851279.1SMR:Q8VYV7
STRING:3702.AT5G66120.2SUPFAM:SSF56796TAIR:AT5G66120TIGRfam:TIGR01357
TIGRFAMs:TIGR01357UniGene:At.28642UniPathway:UPA00053UniProt:F4JZ33
Coordinates (TAIR10) chr5:-:26431516..26433079
Molecular Weight (calculated) 37082.90 Da
IEP (calculated) 7.10
GRAVY (calculated) -0.03
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MFRHVHGKRV LVVTNDRVAP LYLDKTIDAL TRGNPNVTVE SVILPDGEKY KDMDTLMKVF DKAIESRLDR RCTFVALGGG VIGDMCGYAA ASYLRGVNFI
101: QIPTTVMAQV DSSVGGKTGI NHRLGKNLIG AFYQPQCVLV DTDTLNTLPD REMASGLAEV IKYGLIRDAE FFEWQEKNIE ALLARDPAAL AFAIKRSCEN
201: KADVVSQDEK ESGLRATLNL GHTFGHAIET GFGYGEWLHG EAVAAGTVMA VDMSYRLGWI DESIVKRVNK ILVRAKLPTT PPESMTVSMF KSIMAVDKKV
301: ADGLLRLILL KGPLGNCVFT GDYDREALDA TLRAFSKS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)