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AT5G65930.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.951
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : kinesin-like calmodulin-binding protein (ZWICHEL)
Curator
Summary (TAIR10)
encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.
Computational
Description (TAIR10)
ZWICHEL (ZWI); FUNCTIONS IN: microtubule motor activity, calmodulin binding; INVOLVED IN: trichome branching, pollen germination; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), FERM, N-terminal (InterPro:IPR018979), Band 4.1 domain (InterPro:IPR019749), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.1); Has 92234 Blast hits to 53602 proteins in 2354 species: Archae - 1118; Bacteria - 10667; Metazoa - 44581; Fungi - 7061; Plants - 5079; Viruses - 192; Other Eukaryotes - 23536 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G65930EnsemblPlants:AT5G65930.1entrez:836723hmmpanther:PTHR24115hmmpanther:PTHR24115:SF470ncoils:CoilPfam:PF00225
Pfam:PF00373Pfam:PF00784Pfam:PF09379Pfscan:PS50057Pfscan:PS50067Pfscan:PS51016scanprosite:PS00411
tair10-symbols:KCBPtair10-symbols:PKCBPtair10-symbols:ZWI
Coordinates (TAIR10) chr5:-:26370369..26376394
Molecular Weight (calculated) 143328.00 Da
IEP (calculated) 7.21
GRAVY (calculated) -0.49
Length 1259 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEGQRGSNSS LSSGNGTEVA TDVSSCFYVP NPSGTDFDAE SSSLPPLSPA PQVALSIPAE LAAAIPLIDR FQVEAFLRLM QKQIQSAGKR GFFYSKKSSG
0101: SNVRERFTFE DMLCFQKDPI PTSLLKINSD LVSRATKLFH LILKYMGVDS SDRSTPPSLD ERIDLVGKLF KKTLKRVELR DELFAQISKQ TRHNPDRQYL
0201: IKAWELMYLC ASSMPPSKDI GGYLSEYIHN VAHDATIEPD AQVLAVNTLK ALKRSIKAGP RHTTPGREEI EALLTGRKLT TIVFFLDETF EEISYDMATT
0301: VSDAVELAGT IKLSAFSSFS LFECRKVVSS SKSSDPGNEE YIGLDDNKYI GDLLAEFKAI KDRNKGEILH CKLVFKKKLF RESDEAVTDL MFVQLSYVQL
0401: QHDYLLGNYP VGRDDAAQLC ALQILVGIGF VNSPESCIDW TSLLERFLPR QIAITRAKRE WELDILARYR SMENVTKDDA RQQFLRILKA LPYGNSVFFS
0501: VRKIDDPIGL LPGRIILGIN KRGVHFFRPV PKEYLHSAEL RDIMQFGSSN TAVFFKMRVA GVLHIFQFET KQGEEICVAL QTHINDVMLR RYSKARSAAN
0601: SLVNGDISCS SKPQNFEVYE KRLQDLSKAY EESQKKIEKL MDEQQEKNQQ EVTLREELEA IHNGLELERR KLLEVTLDRD KLRSLCDEKG TTIQSLMSEL
0701: RGMEARLAKS GNTKSSKETK SELAEMNNQI LYKIQKELEV RNKELHVAVD NSKRLLSENK ILEQNLNIEK KKKEEVEIHQ KRYEQEKKVL KLRVSELENK
0801: LEVLAQDLDS AESTIESKNS DMLLLQNNLK ELEELREMKE DIDRKNEQTA AILKMQGAQL AELEILYKEE QVLRKRYYNT IEDMKGKIRV YCRIRPLNEK
0901: ESSEREKQML TTVDEFTVEH PWKDDKRKQH IYDRVFDMRA SQDDIFEDTK YLVQSAVDGY NVCIFAYGQT GSGKTFTIYG HESNPGLTPR ATKELFNILK
1001: RDSKRFSFSL KAYMVELYQD TLVDLLLPKS ARRLKLEIKK DSKGMVFVEN VTTIPISTLE ELRMILERGS ERRHVSGTNM NEESSRSHLI LSVVIESIDL
1101: QTQSAARGKL SFVDLAGSER VKKSGSAGCQ LKEAQSINKS LSALGDVIGA LSSGNQHIPY RNHKLTMLMS DSLGGNAKTL MFVNVSPAES NLDETYNSLL
1201: YASRVRTIVN DPSKHISSKE MVRLKKLVAY WKEQAGKKGE EEDLVDIEED RTRKDEADS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)