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AT5G65510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AINTEGUMENTA-like 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AINTEGUMENTA-like 7 (AIL7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: AINTEGUMENTA-like 6 (TAIR:AT5G10510.2); Has 7565 Blast hits to 5160 proteins in 254 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 7501; Viruses - 2; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
EMBL:AB026639EMBL:AY560887EMBL:CP002688EnsemblPlants:AT5G65510EnsemblPlants:AT5G65510.1entrez:836677Gene3D:3.30.730.10
GeneID:836677Genevisible:Q6J9N8GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009873
GO:GO:0010492GO:GO:0060771GO:GO:0060772GO:GO:0060774Gramene:AT5G65510.1hmmpanther:PTHR32467hmmpanther:PTHR32467:SF33
HOGENOM:HOG000239258InParanoid:Q6J9N8InterPro:IPR001471InterPro:IPR016177InterPro:IPR031112KEGG:ath:AT5G65510KO:K09285
OMA:LEEMNHMPANTHER:PTHR32467PaxDb:Q6J9N8Pfam:PF00847Pfam:Q6J9N8Pfscan:PS51032PRIDE:Q6J9N8
PRINTS:PR00367PRO:PR:Q6J9N8PROSITE:PS51032ProteinModelPortal:Q6J9N8Proteomes:UP000006548RefSeq:NP_201354.5SMART:SM00380
SMR:Q6J9N8SUPFAM:SSF54171TAIR:AT5G65510tair10-symbols:AIL7UniGene:At.50720UniProt:Q6J9N8
Coordinates (TAIR10) chr5:+:26185829..26189413
Molecular Weight (calculated) 55450.90 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.69
Length 498 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPPMTNCLT FSLSPMEMLK STDQSHFSSS YDDSSTPYLI DNFYAFKEEA EIEAAAASMA DSTTLSTFFD HSQTQIPKLE DFLGDSFVRY SDNQTETQDS
101: SSLTPFYDPR HRTVAEGVTG FFSDHHQPDF KTINSGPEIF DDSTTSNIGG THLSSHVVES STTAKLGFNG DCTTTGGVLS LGVNNTSDQP LSCNNGERGG
201: NSNKKKTVSK KETSDDSKKK IVETLGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQAR KGRQVYLGGY DKEDRAARAY DLAALKYWGS TATTNFPVSS
301: YSKELEEMNH MTKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFATEEEA AEAYDIAAIK FRGINAVTNF EMNRYDIEAV
401: MNSSLPVGGA AAKRHKLKLA LESPSSSSSD HNLQQQQLLP SSSPSDQNPN SIPCGIPFEP SVLYYHQNFF QHYPLVSDST IQAPMNQAEF FLWPNQSY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)